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Submitted SNP(ss) Details: ss12579943           
Submitter
HandleSC_SNP
Submitter SNP IDchr12.NT_029419.10_569621
RefSNP(rs#)rs8175936
Submitted Batch IDCHR20_NA17119_200306-2
Submitted DateJul 16, 2003
Publication Cited[1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 16 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA17119_200306
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP45080-301d08.p1cposition:-170quality:56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12579943|allelePos=256|len=511|taxid=9606|alleles='C/G'|mol=Genomic
 accaatatcc actgttctgc agtcactgct gctgataccc aggaaagcag ggtctggaat
 ggacctccag caaactccaa cagacctgaa gctaagggtc ctgactgtta gaaggaaaac
 taacaaacag aaaggacatt cactccaaaa acccatctgt acatcaccat cattaaagac
 caaaggtaga taaagccaca aagatgggga aaaaacagag cagaaaaact ggaaactcta
 aaaatcggag cacac
 S
 tcctcctcca aaggaacaca gatcctcacc agcaatggaa caaagctgga tggagaatga
 ctttgacgag ttgagagaag aagtcttcag acgatcaaac tactctgagg taaaggagga
 agttcaaaca agtggcaaag aggttaagaa cgttgaaaaa aaattagatg aatggctaac
 tagagtaact aacgcggaga agtccttaaa ggacctgatg gagctgaaaa ccaaggctca
 gaactgagtg atgaa

  Submitted Frequency for ss12579943 back to top
There is no frequency submission for ss12579943.


  dbSNP summary of Genotypes for ss12579943 back to top
No sufficient data to compute Hardy-weinberg probability for ss12579943.


  Submitted individual genotype for ss12579943 back to top
There is no individual genotype data for ss12579943.

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