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Submitted SNP(ss) Details: ss12579959           
Submitter
HandleSC_SNP
Submitter SNP IDchr11.NT_035158.2_257764
RefSNP(rs#)rs8187606
Submitted Batch IDCHR20_NA10470_200306-2
Submitted DateJul 16, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 16 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA10470_200306
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP45079-1579e02.p1cposition:396quality:35

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12579959|allelePos=256|len=511|taxid=9606|alleles='T/G'|mol=Genomic
 ggcctgaatg agtcactaaa tattgcttat gagattctac aaaaaccatg tttccaaact
 gctgaatcaa aaaaattgtt taactctgtc aggtgaatgc acacatcaca gtgtagtttc
 tcagagatct cctttctagt ttttacctga agttattttc tttttcacca tagacctcag
 tgctctctca agtatccctt tccatgttgt acaaaaacag agtttctaaa ctgctgaatg
 aagagaaagt ttaac
 K
 ctgtgagata aatgcacaca tcacaaagca gtttctcaga tagcttcctt ctagttttta
 cactgggata tttacttttt tgtgattgtc ctcaatgagc tcccaaatgt ccttttgcag
 aatggacaaa aaggatgatt ccaaactgct gaatccaaag aaaagtttaa ctctgtgaga
 tgaatgcaca catcacaagg gagtttctca gaaagcttct ttctagtttt tatctgaaga
 tatatttttt cacca

  Submitted Frequency for ss12579959 back to top
There is no frequency submission for ss12579959.


  dbSNP summary of Genotypes for ss12579959 back to top
No sufficient data to compute Hardy-weinberg probability for ss12579959.


  Submitted individual genotype for ss12579959 back to top
There is no individual genotype data for ss12579959.

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