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Submitted SNP(ss) Details: ss12579970           
Submitter
HandleSC_SNP
Submitter SNP IDchr19.NT_078103.1_13476
RefSNP(rs#)rs2626933
Submitted Batch IDCHR20_NA10470_200306-2
Submitted DateJul 16, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 16 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA10470_200306
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP45079-966c11.p1cposition:204quality:37

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12579970|allelePos=256|len=511|taxid=9606|alleles='C/T'|mol=Genomic
 atgcacacat cccaaagaag tttctgagaa tgcttctgtc aattttttct gtggagatat
 tcccatttca acgaaggctt ctcaccacta gaaatatcca cttgcacatt ctacaaaaag
 agtgtttcca aactgctcta ccaaaggaag gctcaaatct gtgagttgaa tgcacacatc
 acaaagaaat ttctgagaat gcttctgtct agtttttatg tggagatatt cccatttcca
 acgaaggcct ctaac
 Y
 actagtaata cccacttgca gattctacaa aaagaggttt aaaaactgct ctatcaaaag
 aagatttcaa ctctctgagt tgaatgcaca catcacaagg aagtttctga gaatgcttca
 gtccagtttt tatgtggaga tattcccgtt tccaacgaag gcctctaaac acttgcagat
 tccacaaaaa gagtgtttca aaaatgctct atcaaaagga aggttcaact ctgtgagttg
 aatgcacaca tcaAA

  Submitted Frequency for ss12579970 back to top
There is no frequency submission for ss12579970.


  dbSNP summary of Genotypes for ss12579970 back to top
No sufficient data to compute Hardy-weinberg probability for ss12579970.


  Submitted individual genotype for ss12579970 back to top
There is no individual genotype data for ss12579970.

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