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Submitted SNP(ss) Details: ss12579972           
Submitter
HandleSC_SNP
Submitter SNP IDchr19.NT_078103.1_13517
RefSNP(rs#)rs2648962
Submitted Batch IDCHR20_NA10470_200306-2
Submitted DateJul 16, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 16 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA10470_200306
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP45079-966c11.p1cposition:245quality:35

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12579972|allelePos=256|len=511|taxid=9606|alleles='A/C'|mol=Genomic
 ATtttttctg tggagatatt cccatttcaa cgaaggcttc tcaccactag aaatatccac
 ttgcacattc tacaaaaaga gtgtttccaa actgctctac caaaggaagg ctcaaatctg
 tgagttgaat gcacacatca caaagaaatt tctgagaatg cttctgtcta gtttttatgt
 ggagatattc ccatttccaa cgaaggcctc taaccactag taatacccac ttgcagattc
 tacaaaaaga ggttt
 M
 aaaactgctc tatcaaaaga agatttcaac tctctgagtt gaatgcacac atcacaagga
 agtttctgag aatgcttcag tccagttttt atgtggagat attcccgttt ccaacgaagg
 cctctaaaca cttgcagatt ccacaaaaag agtgtttcaa aaatgctcta tcaaaaggaa
 ggttcaactc tgtgagttga atgcacacat caaaaggaaa tttctgagaa tgcttctgtc
 taatttttat gtgaa

  Submitted Frequency for ss12579972 back to top
There is no frequency submission for ss12579972.


  dbSNP summary of Genotypes for ss12579972 back to top
No sufficient data to compute Hardy-weinberg probability for ss12579972.


  Submitted individual genotype for ss12579972 back to top
There is no individual genotype data for ss12579972.

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