Submitted SNP(ss) Details: ss12779038

Submitted SNP(ss) Details: ss12779038

Submitter
Handle	SC_SNP
Submitter SNP ID	NT_007299.12_10067777
RefSNP(rs#)	rs9341321
Submitted Batch ID	CHR6_NA11321
Submitted Date	Oct 21, 2003
Publication Cited	[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Oct 21 2003 12:00:00:000AM

Resource Links
GenBank Accession	NT_007299
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	CHR6_NA11321
Ascertainment Samplesize	5
Population	N.D.

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 1
Genotype Submission	N.D.
Haplotype	N.D.

Comment
sequence:S6A_3-14j18.q1kposition:518quality:56sequence:S6A_2-435b16.q1kposition:-439quality:48sequence:S6A_2-508d01.p1kposition:-356quality:56sequence:S6A_2-547m08.q1kposition:584quality:48

Fasta sequence (Legend)

 GCAGTTGAGG TCTACACAAA ATGATGAGAT GAGTTATAAA ACACTGGCCA TGCAAGATTG
 AAAAGGAAAT GCAGAAGAGA ACGTAAGATG CTAGGTTGCA AAAATCCTAG GTGAAAAAAA
 TGAAGTTAAA AAGCCTTAGT GAGCTAAAAT ATAAGATTTA ACTATAAAAA GCAAAACAAA
 CAATTCAGAG AGATGACTAG
 R
 GCTCACATGT GACTCATTTT GGCAGAAGTA GGCAGATTCT TTGCCCAGCC AAAAAGCAAT
 TGGTTGGTTA CCCAAATCCT AGAACCTCAA CAAATCTGAG ATGTTAATTG GATGAGGAGG
 AAGCAGGTTC AGTTTCAAAA ACATGCTATA ATACAAGAAG GCATAAAAAC AAAAATGAGA
 AAAATATAAA ATAATGAAGA

Submitted Frequency for ss12779038

There is no frequency submission for ss12779038.

dbSNP summary of Genotypes for ss12779038

No sufficient data to compute Hardy-weinberg probability for ss12779038.

Submitted individual genotype for ss12779038

There is no individual genotype data for ss12779038.

Disclaimer Privacy statement