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Submitted SNP(ss) Details: ss12779085           
Submitter
HandleSC_SNP
Submitter SNP IDNT_007299.12_10395493
RefSNP(rs#)rs9341354
Submitted Batch IDCHR6_NA11321
Submitted DateOct 21, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 21 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR6_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:S6A_2-664n07.q1kposition:424quality:51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12779085|allelePos=2000|len=3973|taxid=9606|alleles='T/C'|mol=Genomic
 Tttttctata atggtaataa tcatatgcat tcctgccaac agtgtgcaat ggttcccatt
 tctccatatc cttgccaaca ctcattatct tttgtatttt tgataacagc cattataaca
 gaagtgaggt gatatttcat tgtaattttg atttgcattt ccctgatgat tactgataaa
 cgggttttca tatacctgtt ggccatttgt atatcttctt ttgaaaaatg tttattcagg
 tttttactca tttctacatt ggattattta ttttcttgct attgagttga gttccttata
 cagcaataca tagctaaaat atgattatgt gttttgagga atacgttatg tgattttgtt
 atgtgaacat catagagtgt acttacacaa atatagatgg tatagcctat tgctcctagg
 tcacaaacct gtacggcgtg ttattgtact gaatactatg ggcaattgta gtacaatggt
 aagtatttgt gtatctaaac taaaaaagaa cagtaaaaat atggtattat aatcttatgg
 gacaatggtt tgttgctgac agaaacattg ttatgtagta catgactgat attttatata
 ttaattcctc atcagatgta tagtttgcaa atattttctt ctattctata ggttgtctct
 tcactctgtt gattgtttcc tttgttgtgc agaagctttt tagtttgatg tagtcccatt
 tgtctatttt tacttttgtt gtctctgctt gtgaggtcat atctaaaaaa ccactgtcca
 gactaatgtc atataacttc tcacctacaa tttcttccag tagtttcata gttttgggtt
 ttacatttaa atttttaatc cacttgagtc aattttgata tgtggtaaga tataaggatc
 tgatttcgtt tttttttttt tttttttttg caaaaggata cccagttttc tcaaaaccat
 ttattgaaga gattttcctt tgattgttat gtatttttag catctttgtc aaaaatcagt
 tggttgataa tgcctggatt tatttctggg cctctttatt ctgttccatt gggtgatatg
 tctgttttaa ttctagtaca atgatatttt gtttaatata attttgtagt atattttaaa
 atcaggtagt gtcatgcttc caactgtgct ttttttgtgc aagattactt tggctattca
 tagtctgttg tggagccata caaatgttag aattattttt tccatttctg tgaagaatgt
 cattggtatt ttgataggaa ttgcactgaa tctgtatgtt gttttggata atatgagcat
 ttttacaata tttattcttt caatccataa atatgggaaa gcttttcatt tgtgtttact
 tctttttctg ataaatgttt tatagttttc agagcagaga tttttcacct ccttggttaa
 atgtattccg tgtattccta ttttttgtat cttattgcaa atgggtcaat ttattttttt
 TACTCCGCAt gactgtgtat ttaaagtgag attttataga cagcatatag ttgggtgttt
 ttgaaaaaat ctactctgac aatctctgtc ctttaattgg tgtttttaga ccattcatac
 ttaaaatgat tattgataca gttagattca tatctaccat gcttgtaact gttcactatt
 tctttctctt gtttttgttg cttccttcta ctctctgtct gacttctctg gttgcataat
 aattaagcat tttatatgat tccattttgg ttctttctta gaatattaat tagagttttt
 tttccttttt ttcagtttta agttgttgcc ccagagctca cagtatacat tcaccattaa
 tccaagcacg tttaaataac attctaccac ttcatgtgca ttgcaggtac ctcttaatag
 agtattccca atttcttttt cccattttta tcatttattg cacttatcta taagctgtaa
 tatctataag ctataatat
 Y
 tataatatct ataagctata atatctataa gctataatat ctataagcta taataacaca
 aaccatggct attatttttt ttaaactgtt atcatttagg tcaactaaaa ataataaaaa
 taaaatattt tattttacct ttgtttattc cttgtcctat cttcttttta gatgcagatc
 caagtttctg acttagatga atttccttct tcttgaagaa tattttttta acatatctta
 cagaacatgc ctatggaaat gaattccctc aatgtttgtt tgagagagtc ttaatttctc
 cttcactttt gaaggatagt tttactagat atagaatcct atgttggtag cattttttct
 tttaacactt taagaatttc attacactct cttcttgctt acatgttttc tgaggagaag
 ttcgctgtaa ttctcatcct tATGtgtttt tggttgtcta tagtttgaat atgataaacc
 aaagaatagg ttttttaatc attatttact cttcttggcg ttctctgagc ctcctggatc
 tgtggtttga tgtttgtcat caatttttgt aaagttctca gccgtttttc cttaaaaatg
 tcttctgctc tgctctttct tctgcttcta atatttatgc acatattaca ggttttgaaa
 ttgttccaca gtgcttagat attctgatta tcattactgt tagtgtcttt gatatctatc
 attttttatt agaggtttca tctctgtgct tatgctaccc acttgttctt gcatgttgtc
 tactttttcc attagatccc ttaacatata aatcataggt attttcagtt tcctactgat
 aattccaaag tctgtgttta tatctaggtc tggttctact gctggctttg tctcttctga
 atatgctctt tcttgccttt tggcacactt tgtaacttct tattaaaaga atagcttctt
 attctcttca atacgaattg aagagaaagg cctgtagtgt gaggttttgg ttgatatggc
 taggagttgg ctgtgtttac tgtttgctgt ggctgtagtt gccagaggct ttaagttcct
 ctaggatttt catttttatt ttcctgtggg tttccctcga acacctcctt aaatagtttt
 tgcgctttgc agcatttgca gctataattc agtcttattt gttggaactc tgttgctttg
 gtgataaatt atggaggaag gagagtactt catgatcttt tgattaaatc tcagtttttc
 attagggctt atccctagaa tgtgaccttc acagtgtttc ctaacttttc tcctccccgt
 aggaaagaga ttgcaagact aaagttttct aaaattgaat aaataccctt ctccttaggt
 gtaataaggc tatggtaaag tcttttccct agagagtagc tcttttcaat gaagaaaatt
 ctgagtatat tgcaaaaaaa ttaatttcca tctcattaga gccacaagag tgtttttgtt
 ttgttttgtt ttttggctct gagaacctgg tggggttcct caaggtaaaa tagatgaaat
 gtggggctcc tcctaagaca gcagcctcca ggagttcccc attctcacac tagtccacac
 tcagccccca gcaattagtc aaaattacca ttaaagtttt cctaccagtt actggcccca
 gtggttctgc tcccaatagg ctcatctcag ctgtgatttt ctgtgttcac ttgtgttttg
 agatttcagg gtagtagttt gccctgcaaa ctcagttctc taatggatct aagaaaagtc
 attaattttc tgtttgttct ctttggttct tattgtgagg atggcagtga cagcttccaa
 gctcttttca tgtcaAACTG AATCTAGAAA CCCCCATATA GTTTTTCATC TTTCCATTGA
 TTGCCACCAT GCATTATCTG CCCAGTGACA TCATAGGCTC TCAATATATA TTG

  Submitted Frequency for ss12779085 back to top
There is no frequency submission for ss12779085.


  dbSNP summary of Genotypes for ss12779085 back to top
No sufficient data to compute Hardy-weinberg probability for ss12779085.


  Submitted individual genotype for ss12779085 back to top
There is no individual genotype data for ss12779085.

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