Submitter | Handle | SC_SNP | Submitter SNP ID | NT_007299.12_10395493 | RefSNP(rs#) | rs9341354 | Submitted Batch ID | CHR6_NA11321 | Submitted Date | Oct 21, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_007299
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR6_NA11321 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | T/C | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:S6A_2-664n07.q1kposition:424quality:51 |
>gnl|dbSNP|ss12779085|allelePos=2000|len=3973|taxid=9606|alleles='T/C'|mol=Genomic Tttttctata atggtaataa tcatatgcat tcctgccaac agtgtgcaat ggttcccatt
tctccatatc cttgccaaca ctcattatct tttgtatttt tgataacagc cattataaca
gaagtgaggt gatatttcat tgtaattttg atttgcattt ccctgatgat tactgataaa
cgggttttca tatacctgtt ggccatttgt atatcttctt ttgaaaaatg tttattcagg
tttttactca tttctacatt ggattattta ttttcttgct attgagttga gttccttata
cagcaataca tagctaaaat atgattatgt gttttgagga atacgttatg tgattttgtt
atgtgaacat catagagtgt acttacacaa atatagatgg tatagcctat tgctcctagg
tcacaaacct gtacggcgtg ttattgtact gaatactatg ggcaattgta gtacaatggt
aagtatttgt gtatctaaac taaaaaagaa cagtaaaaat atggtattat aatcttatgg
gacaatggtt tgttgctgac agaaacattg ttatgtagta catgactgat attttatata
ttaattcctc atcagatgta tagtttgcaa atattttctt ctattctata ggttgtctct
tcactctgtt gattgtttcc tttgttgtgc agaagctttt tagtttgatg tagtcccatt
tgtctatttt tacttttgtt gtctctgctt gtgaggtcat atctaaaaaa ccactgtcca
gactaatgtc atataacttc tcacctacaa tttcttccag tagtttcata gttttgggtt
ttacatttaa atttttaatc cacttgagtc aattttgata tgtggtaaga tataaggatc
tgatttcgtt tttttttttt tttttttttg caaaaggata cccagttttc tcaaaaccat
ttattgaaga gattttcctt tgattgttat gtatttttag catctttgtc aaaaatcagt
tggttgataa tgcctggatt tatttctggg cctctttatt ctgttccatt gggtgatatg
tctgttttaa ttctagtaca atgatatttt gtttaatata attttgtagt atattttaaa
atcaggtagt gtcatgcttc caactgtgct ttttttgtgc aagattactt tggctattca
tagtctgttg tggagccata caaatgttag aattattttt tccatttctg tgaagaatgt
cattggtatt ttgataggaa ttgcactgaa tctgtatgtt gttttggata atatgagcat
ttttacaata tttattcttt caatccataa atatgggaaa gcttttcatt tgtgtttact
tctttttctg ataaatgttt tatagttttc agagcagaga tttttcacct ccttggttaa
atgtattccg tgtattccta ttttttgtat cttattgcaa atgggtcaat ttattttttt
TACTCCGCAt gactgtgtat ttaaagtgag attttataga cagcatatag ttgggtgttt
ttgaaaaaat ctactctgac aatctctgtc ctttaattgg tgtttttaga ccattcatac
ttaaaatgat tattgataca gttagattca tatctaccat gcttgtaact gttcactatt
tctttctctt gtttttgttg cttccttcta ctctctgtct gacttctctg gttgcataat
aattaagcat tttatatgat tccattttgg ttctttctta gaatattaat tagagttttt
tttccttttt ttcagtttta agttgttgcc ccagagctca cagtatacat tcaccattaa
tccaagcacg tttaaataac attctaccac ttcatgtgca ttgcaggtac ctcttaatag
agtattccca atttcttttt cccattttta tcatttattg cacttatcta taagctgtaa
tatctataag ctataatat
Y
tataatatct ataagctata atatctataa gctataatat ctataagcta taataacaca
aaccatggct attatttttt ttaaactgtt atcatttagg tcaactaaaa ataataaaaa
taaaatattt tattttacct ttgtttattc cttgtcctat cttcttttta gatgcagatc
caagtttctg acttagatga atttccttct tcttgaagaa tattttttta acatatctta
cagaacatgc ctatggaaat gaattccctc aatgtttgtt tgagagagtc ttaatttctc
cttcactttt gaaggatagt tttactagat atagaatcct atgttggtag cattttttct
tttaacactt taagaatttc attacactct cttcttgctt acatgttttc tgaggagaag
ttcgctgtaa ttctcatcct tATGtgtttt tggttgtcta tagtttgaat atgataaacc
aaagaatagg ttttttaatc attatttact cttcttggcg ttctctgagc ctcctggatc
tgtggtttga tgtttgtcat caatttttgt aaagttctca gccgtttttc cttaaaaatg
tcttctgctc tgctctttct tctgcttcta atatttatgc acatattaca ggttttgaaa
ttgttccaca gtgcttagat attctgatta tcattactgt tagtgtcttt gatatctatc
attttttatt agaggtttca tctctgtgct tatgctaccc acttgttctt gcatgttgtc
tactttttcc attagatccc ttaacatata aatcataggt attttcagtt tcctactgat
aattccaaag tctgtgttta tatctaggtc tggttctact gctggctttg tctcttctga
atatgctctt tcttgccttt tggcacactt tgtaacttct tattaaaaga atagcttctt
attctcttca atacgaattg aagagaaagg cctgtagtgt gaggttttgg ttgatatggc
taggagttgg ctgtgtttac tgtttgctgt ggctgtagtt gccagaggct ttaagttcct
ctaggatttt catttttatt ttcctgtggg tttccctcga acacctcctt aaatagtttt
tgcgctttgc agcatttgca gctataattc agtcttattt gttggaactc tgttgctttg
gtgataaatt atggaggaag gagagtactt catgatcttt tgattaaatc tcagtttttc
attagggctt atccctagaa tgtgaccttc acagtgtttc ctaacttttc tcctccccgt
aggaaagaga ttgcaagact aaagttttct aaaattgaat aaataccctt ctccttaggt
gtaataaggc tatggtaaag tcttttccct agagagtagc tcttttcaat gaagaaaatt
ctgagtatat tgcaaaaaaa ttaatttcca tctcattaga gccacaagag tgtttttgtt
ttgttttgtt ttttggctct gagaacctgg tggggttcct caaggtaaaa tagatgaaat
gtggggctcc tcctaagaca gcagcctcca ggagttcccc attctcacac tagtccacac
tcagccccca gcaattagtc aaaattacca ttaaagtttt cctaccagtt actggcccca
gtggttctgc tcccaatagg ctcatctcag ctgtgatttt ctgtgttcac ttgtgttttg
agatttcagg gtagtagttt gccctgcaaa ctcagttctc taatggatct aagaaaagtc
attaattttc tgtttgttct ctttggttct tattgtgagg atggcagtga cagcttccaa
gctcttttca tgtcaAACTG AATCTAGAAA CCCCCATATA GTTTTTCATC TTTCCATTGA
TTGCCACCAT GCATTATCTG CCCAGTGACA TCATAGGCTC TCAATATATA TTG
There is no frequency submission for ss12779085.
No sufficient data to compute Hardy-weinberg probability for ss12779085.
There is no individual genotype data for ss12779085.
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