>gnl|dbSNP|ss12779089|allelePos=1233|len=1433|taxid=9606|alleles='A/G'|mol=Genomic
AAATTCATCA TTAGTGATGA CTAGTGAGTG TCATTCAAGG AAAGATAGCT TGACATTCAA
ATGTTCTACA ACATGCCACG GATTTTTTCT TTTAAGAGAC AAGGtctttt gaaaagtgtc
tgttcgtgtc ctttgcccac tttttaatag ggttcttttt tttttcttgt aaatttgttt
aagttcctta tagaccctgg atattagacc cttgttggat gcatagtttg cagaaatttt
ctcccattct gtagtttgtc tgtttactct attgatagtt tcttttgctg tgaagaagct
ctttagtttt attagatccc atttgtcaat ttttgctttt gttgtaaatg cttttggcat
ctttgtcatg aaatatttgc ctgtgcctat gtcccggaat ggtatacatg cagccagcaa
ttgtattaaa aaaagcttta acatcactga tcattagaga aacacaaaaa tcaaaaccac
agtgagatac catcttacac cagtcagaat ggctattatt aagaagtcca aaaaatagca
gatgcaggca aggttgtgga taaaaaggaa tgcttataca ctgttggtgg aagtgtaaat
tagttcaacc attgtggaag acagagtggc aattcctcaa agacctaaag acagaaatac
catttgactc agcaacccca ttactgtgta tatacccaaa ggaatataaa tcatactatt
ataaagacac atgcacacgt atgttcattg cagctattca caatagcaaa gacatataat
caacttaaat gcccatcagt gatagactgg ctaaagaaaa tgtgatgcat ataaccacgg
aataccatgc agccataaaa aagaatgaga ttgtgttatt tgcagggaga tggatagagc
tggaggccat tattcttagc atactaaggc atgaacagaa aactaaatac tgcatgttct
cacttataag taggagctaa atgatgagat tacatgaaca catagagggg aacaacacac
aatggggctt ttcagagggt tgagggtggg aggagggaga agatcaggaa aaataactaa
tggatgctag acttaaaatc cgggtgatga aataatctgt aaaacaaacc cctgtgacac
aagtttagct gtgtaacaaa cctacacttg tacccctgaa cttcaaataa aaagtaataa
taataaAAag agatggggtt ttactgtgca ct
R
tgttgctcac tcaggctagt ctctaactcc tgggcttaag caatccttct cctttagcct
ccagagcagc tggaactata ggcATGTATT ATCATGATCC CATGGTAAAA TTTTGTGGAG
TGAGATTGGG AAGTAAGTTA ATTTGAGAAA AGAAACTTCA TAAAAGTGAC ATGTTTGGAA
AAAAATTATA AAAAAAGATA
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | A=0.62389380
| G=0.37610620 | A/G=0.50442475
A/A=0.37168142
G/G=0.12389380
| Pr(chiSq=0.633,df=1)
=0.439 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | G=0.51162791
| A=0.48837209 | A/G=0.46511629
G/G=0.27906978
A/A=0.25581396
| Pr(chiSq=0.206,df=1)
=0.655 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | G=0.54069769
| A=0.45930234 | A/G=0.38372093
G/G=0.34883720
A/A=0.26744187
| Pr(chiSq=4.449,df=1)
=0.050 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | A=0.64601767
| G=0.35398230 | A/G=0.44247788
A/A=0.42477876
G/G=0.13274336
| Pr(chiSq=0.120,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | A=0.71428573
| G=0.28571430 | A/A=0.51020408
A/G=0.40816328
G/G=0.08163265
| Pr(chiSq=0.000,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | G=0.51219511
| A=0.48780489 | A/G=0.43902439
G/G=0.29268292
A/A=0.26829270
| Pr(chiSq=0.605,df=1)
=0.439 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | G=0.50588238
| A=0.49411765 | A/G=0.49411765
G/G=0.25882354
A/A=0.24705882
| Pr(chiSq=0.011,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | A=0.76136363
| G=0.23863636 | A/A=0.57954544
A/G=0.36363637
G/G=0.05681818
| Pr(chiSq=0.000,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | A=0.66666669
| G=0.33333334 | A/G=0.44444445
A/A=0.44444445
G/G=0.11111111
| Pr(chiSq=0.000,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | A=0.69999999
| G=0.30000001 | A/A=0.50000000
A/G=0.40000001
G/G=0.10000000
| Pr(chiSq=0.113,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | A=0.80419582
| G=0.19580419 | A/A=0.65734267
A/G=0.29370630
G/G=0.04895105
| Pr(chiSq=0.649,df=1)
=0.439 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | A=0.71022725
| G=0.28977272 | A/A=0.52272725
A/G=0.37500000
G/G=0.10227273
| Pr(chiSq=0.696,df=1)
=0.439 | Genotype
Freq. |
