| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_007299.12_18120370 | | RefSNP(rs#) | rs2655674 | | Submitted Batch ID | CHR6_NA07340 | | Submitted Date | Nov 12, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_007299
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR6_NA07340 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | G/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c_g/a |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:S6C_3-96l23.q1kposition:243quality:56 |
>gnl|dbSNP|ss12780009|allelePos=782|len=1248|taxid=9606|alleles='G/A'|mol=Genomic CATAATTATA GTACAAAAGA GTGGAATAAA AAAAACTACA ACATTGGAAA AATATATATT
TGttttgttt cattttttgt ttgtttgttt ttgggacagg gtcttgctct gttgccaggc
tggagtgcag tggcaatctc agctcgctgc agcctcaacc tcctgggctc aagtgatctt
tccacctcaa ccttccaagt ggccgtgact acaggcgtgt accactacgc cccactaatt
tttgtttttt tttgtagaga cgtggtttgg ccatgttgcc caggctgatc tcgagcttct
gggctgaagg gatctgcctg ccccagcttc ccaaagttct gggattatag gcgtgagcca
ccttgtcagg ctGAATAGTA TTTTTTATAG TATGAAAGTA GCATCTGCAA Aaccagtcag
aatggcgatt attaaaaagt caaaaaaata acaaatgctg gcgaggctgt ggagaaaagg
gatgtttata caccaatggt gggaatgcac tgtggaaagt agtttggaga tttttcaaag
aacttaaaac agaactacca ttcaactcag caatcccatt actgggtata tgcccaaaag
aaaataaatt gttctaccaa aaagacatat gcacttatat gttcattgca gcactattca
caatagcaaa gccgtggaat caacctaggt gcccatcaat ggtggactgg ataaagaaaa
tgtgatatat atatatatat atatatatat atatatatat atatgcgcca tggaatacag
c
R
cagccataaa aaagaacaga atcatgtcct ttgcagcaat gtggatgctg ttggaggcca
ttatcctaag taaacaatgc aggaacagaa aaccaaatac tgcatgttct catttacaag
tgggagctaa acactgagta tatacggata taaagaaggg aacaatagac actggggact
actagaggca gaagggaggg agagggatgt ggaatgtggg ggaaaaacta cctattgggt
actatgctca atacctgggt aatgggatca tccatagccc aaacctgagc atcatgcagt
atacccatgt aacaaacctg cacatgtacc tcctgaatcc aaaataaaTA AATTAATTAA
TTAAAGTAGT ATTTGTTCAC TGTGGAATAT TTTGACACAA ACATTTTTAA TCCAATGCAG
AGATATCTAC TGCAAATAGT GTTAAGTATA TTTTTTAAAA TTTTTG
There is no frequency submission for ss12780009.
No sufficient data to compute Hardy-weinberg probability for ss12780009.
There is no individual genotype data for ss12780009.
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