Submitted SNP(ss) Details: ss12780123

Submitted SNP(ss) Details: ss12780123

Submitter
Handle	SC_SNP
Submitter SNP ID	NT_007299.12_19247613
RefSNP(rs#)	rs2789758
Submitted Batch ID	CHR20_NA10470
Submitted Date	Nov 17, 2003
Publication Cited	[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Oct 21 2003 12:00:00:000AM

Resource Links
GenBank Accession	NT_007299
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	CHR20_NA10470
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	C/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	c/t_g

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
sequence:20SNP45079-1318g09.q1cposition:242quality:35

Fasta sequence (Legend)

 CCTCAATTTA CTCTCACATA TCACCTGAAA AATATCATCT GGCATATAAA TGAAGAACTT
 TGTTTATGTT CAAAACCAGG AGACTGAACA TTCAGTCATA ACCTCAAAAT CATGATAGGT
 ACATAGTGTA TTCAGTACAT AGTAAAAGGA GTCATTGAAC ATTTCACTTT TGATAAATGT
 GTTTCTTAGT TCCTATGGTC
 Y
 GGTCACGCCT GTGGTAGGAC AACCCAGCAA TCTGAGCCAA ACCATGTCCT CAAATTATAT
 GCTGGAATTC TCTAAAATTC AACTGTAGCT ATTTATGTGT TGACTGATCA CTACTACTAT
 AGAGATATAT CATTTTAGTT TAATGGAGTT ATTTATAGGG CTAGATTTGT TTTCAAGTAG
 TATCACATGT AAATATTATA

Submitted Frequency for ss12780123

There is no frequency submission for ss12780123.

dbSNP summary of Genotypes for ss12780123

No sufficient data to compute Hardy-weinberg probability for ss12780123.

Submitted individual genotype for ss12780123

There is no individual genotype data for ss12780123.

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