| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_007299.12_4368683 | | RefSNP(rs#) | rs8180678 | | Submitted Batch ID | CHR20_NA11321_extra | | Submitted Date | Nov 14, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_007299
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA11321 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | T/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP45081-455e05.p1cposition:407quality:30 |
>gnl|dbSNP|ss12788115|allelePos=201|len=649|taxid=9606|alleles='T/G'|mol=Genomic TAGGACTTTC TACATATATA GATGATCATC AGTGTACCTC CTACAAATGT GGGAGGCACA
GAAAAGTAGG ACaatattaa taaattcata tattttaaaa tCTCGATTTG TTTCGGCTCC
TCACTTTGTC TGGACCTTGC TCAGAAGATC ACAGATTGCC CGGTGAATTT TACGATCTAT
AAACTATACC ATTAGTATAG
K
GCCTCATGGT TTCTCTGTCT CTCTCTCTCC CCTACtgaga cagccaggtg ggaagaggtt
cccagagaaa ctccaaccag cctgcgcact gagaagagtt cacattgggg tggagccaca
gaactttaca tcctttgcag tggggaggat cctggcccct ccttttcttg ggtggaactt
ggaattcaat ctgtgaggct ggaaacccac tggcagagaa acacatactc tcgctttact
aacagtctct gtttcctctt ttcttccttt tcacccaata aaaccctgct ttactcaccc
ttcaaattgt ctgcaagcct aatttctcgt ggccgtgtga caaggaccct gtctttagct
gaactacaga aaagtcctgg aaTGCTACCA CCTGTTTTTC TCAGAGAAGA AAAATCACAG
TCATGGTGAC TTGCTTTCCT TTTATTCA
There is no frequency submission for ss12788115.
No sufficient data to compute Hardy-weinberg probability for ss12788115.
There is no individual genotype data for ss12788115.
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