Submitter | Handle | SC_SNP | Submitter SNP ID | NT_007592.13_29833597 | RefSNP(rs#) | rs7341358 | Submitted Batch ID | CHR20_NA10470 | Submitted Date | Nov 17, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_007592
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR20_NA10470 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | G/A | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | c_g/a |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:20SNP45079-578b02.p1cposition:225quality:35 |
>gnl|dbSNP|ss12795835|allelePos=1654|len=3654|taxid=9606|alleles='G/A'|mol=Genomic GATACTATGA Tcactcatgc acacaccatc cagcctaaga aataacatgt cccatagtta
cacttctctg ggtaaccctc tctgatccca tccctctccc tgccctacac ccatcagagg
taagccctga atgtgcctct tttaattccg acacatttcc ttgtactttt accacatttg
tgagtagcta tagaaatata tagcaaggtt ctgtgtattt ttaaTAGTGT ATTGAACATA
TTtgtcttag tcttttcctg ctgctatagc aaaatacctt agactgggta atttctaaat
aacagaaata tattcctcac aattctgaag gctgtgaagt ccaagatcaa ggcaccagca
gattccatgt ctagtaagtt cttgtcctct ctttccaaga tggcaccttc tcactgtgtc
ctcacatggc agaggggcaa atgggtgaaa agctctcaca aacaccctca ggtctcttat
aaggtactaa tcccattcgt gagggcagag ccttcatcaa ccttatcacc taaaggcttc
accttttcat actattgcct tggggactaa gtttcaacat gaattttgga gtgacacaac
attcaaacca tagcattctg cccctggccc ccccaaattc ctgtcctcct cacatacaaa
atacattcat ttaatcccaa tggctccaaa gtcttaattc atcccagcat taactttaaa
gtctaagtcc aaagtctcat ctaaatatta tttaaatcag gtatgtgtga gactcaaggg
atgattcctc ctgaaggaaa tttctctcta gctgtgaact tatgaaatca ctgaagttat
gtgcttccaa aatgaaatgt tgtggcaggc attctcattt cataggacag acattcccat
ttcaaaaggg agcaataggT CTGCATgtgg tggctcatgc ctataatcct agctaattga
gaggcgaaag tgggaagcct gcttgaggcc agagattgga gaccagcctg accgatgtaa
gagaccATTA AATAAATACA ATTGTTTATT TTTTTATCTG GAAAAAAATA AAGAATTAAA
ATTCAAATAA Aaaaagagag aaataggaag gaagaaaggg gtaactggtc ccaagtaaat
ccagacttaa tgggacaaac aacattaaat cttaaagctt gagaataatc ttctttgact
cagtgtcctg ccttcctgat atggaggtgg gagttgggtc cccaagtctc cccgaagccc
cactcgcaca gctttgctgg gttcagctca tgtggcagct ctcacaggct ggagttgtgt
gctggtggct ctaccagtct ggggtcttgg aggagaatct tgccccccat gactctgcta
gtcattgccc tagtcaggac tctctgtagc ggccccacac ctgtgcctta actactatag
atttattaga aacctccact ctgcctgggc cctgaggctc tccaggatat cctttgaaat
ctaggtcttc ctggatttca aagaagtaac tatgttccct acagctcgtg cactctgtgt
gtctgtagag ttagcaccac gtgaacactg ccgaggttta ctgctacgtc ctccagaggg
acggcctgag ttatacctgg gcccacttga gcc
R
cagctagggt agccaaggag cactgcaccc aagtgtaggg agcagagaca ggaggtggcc
ctgggcagtg acttccaatg cctcacagtg tcctgggctc ctcccccaga actgttctgc
tctcaagacc ctgacatctg gacctgaaag atctctgaag tgcattcagg gtcattcttc
cattttctac ccatactaat tttattaaat gttcacttgg ccacaccctt ggtattgtct
cctgaacatg cttttgcatt ctttacaata tggtcagact gaaaattttc caaatcttta
agttctcctt ctcttttgat tataaatttc atctttcatt tctctcttct catattttgc
tataagcagt caagggcagc catgctgtac cctcaatact ttgcttagag atttcttcca
ccaaatattc tatttcattg ctcataagtc tttgctccca tgaaacactt ggacatagac
acaattcagc caagttattt gccactttgt aacaaaaaga tggcatttcc tctggtctcc
aatgccatgc tcctcatttc tatctcagac ctcatcagaa tggcctttac tgttcatatt
tctaccatta ttatgttcac aaccacttag ataatctctg tgaagattga aatttttggc
cgggcgcagt ggctcacgcc tgtaatccca gcactttggg aggccgaggc aggtggatca
tgcggtcagg agatcgagac catcctggct agcatggtga aaccccgtct ctactaaaaa
tacaaaaaat tagctgggtg cggtggcggg cgcctgtagt cccagctact cgggaggctg
aggcaggaga atggcgtgaa cctgggaggc ggagtgagca gagcagtgag cagagatcgt
gccactgcac tccagcctgg gcgacagagt gagactctgt ctcaaaaaaa aaaaaaaaga
ctgaaatttt ctacatagct ctcatcttct tctgagctct caccagaatc accttgtatg
gcccatttgt ggaaatatag acttttttct atcccaccac ccagttccca agctactgct
acatttttag gtatttgtta catgactccc cactctcggt accaatttct atcttagtct
gtgcctgctg ttataacaaa ataccttaga ctgggtaatt tttgaaaaat agaaatttat
ttctcataat ttagagggtg ggaagcccaa gatcaaggca ccagtgggtt tgatgtctag
taagggcttg ctctctgctt ctgagatggt gtcttctcac tgtgtcctca catgatgggg
aaggagtgaa cactatgccc tcacatcaca gaaggcaaaa gggcaaaaag ggctcacaaa
ctcacttagg cctcttttat aaggacgcta atcccattct tgagagcaga gccctcatga
tctaatcatc ttctggaggc ttcacctctt aatactatca ttgcattaag gattaagttt
tatcatgaat tttggaggaa cacaacattc aaatcatagA AAtatttttc tgtaattttt
tggtccaaca ttatgtttgt gtgagattca ttcacattga cacgagcagt cctgttttgt
ggatttttaa ccaccattcc atattccgtt gtataataca gcacagttta tctgtcaacc
ttttaatgga catttgagtt gttctctttt tttctttctg aattacaaat gttgggtgca
atgtacattc ttacttgtgc atttctctgg ggcatataac taggagtaga attgccaggt
ctgactacca cctgctttcg caattttact atgttaagtt gttcttcaca gtggtcacac
cagtttaccc tctcatcagt aataaaagag agcttccttt gtctagcctt ctcaccaata
tttagtgtct tcagacttaa ttgttgctaa cctgaagtat gtgaaattgc cttatgattt
taatttgcat attccagatt
There is no frequency submission for ss12795835.
No sufficient data to compute Hardy-weinberg probability for ss12795835.
There is no individual genotype data for ss12795835.
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