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Submitted SNP(ss) Details: ss12795835           
Submitter
HandleSC_SNP
Submitter SNP IDNT_007592.13_29833597
RefSNP(rs#)rs7341358
Submitted Batch IDCHR20_NA10470
Submitted DateNov 17, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 21 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA10470
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP45079-578b02.p1cposition:225quality:35

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12795835|allelePos=1654|len=3654|taxid=9606|alleles='G/A'|mol=Genomic
 GATACTATGA Tcactcatgc acacaccatc cagcctaaga aataacatgt cccatagtta
 cacttctctg ggtaaccctc tctgatccca tccctctccc tgccctacac ccatcagagg
 taagccctga atgtgcctct tttaattccg acacatttcc ttgtactttt accacatttg
 tgagtagcta tagaaatata tagcaaggtt ctgtgtattt ttaaTAGTGT ATTGAACATA
 TTtgtcttag tcttttcctg ctgctatagc aaaatacctt agactgggta atttctaaat
 aacagaaata tattcctcac aattctgaag gctgtgaagt ccaagatcaa ggcaccagca
 gattccatgt ctagtaagtt cttgtcctct ctttccaaga tggcaccttc tcactgtgtc
 ctcacatggc agaggggcaa atgggtgaaa agctctcaca aacaccctca ggtctcttat
 aaggtactaa tcccattcgt gagggcagag ccttcatcaa ccttatcacc taaaggcttc
 accttttcat actattgcct tggggactaa gtttcaacat gaattttgga gtgacacaac
 attcaaacca tagcattctg cccctggccc ccccaaattc ctgtcctcct cacatacaaa
 atacattcat ttaatcccaa tggctccaaa gtcttaattc atcccagcat taactttaaa
 gtctaagtcc aaagtctcat ctaaatatta tttaaatcag gtatgtgtga gactcaaggg
 atgattcctc ctgaaggaaa tttctctcta gctgtgaact tatgaaatca ctgaagttat
 gtgcttccaa aatgaaatgt tgtggcaggc attctcattt cataggacag acattcccat
 ttcaaaaggg agcaataggT CTGCATgtgg tggctcatgc ctataatcct agctaattga
 gaggcgaaag tgggaagcct gcttgaggcc agagattgga gaccagcctg accgatgtaa
 gagaccATTA AATAAATACA ATTGTTTATT TTTTTATCTG GAAAAAAATA AAGAATTAAA
 ATTCAAATAA Aaaaagagag aaataggaag gaagaaaggg gtaactggtc ccaagtaaat
 ccagacttaa tgggacaaac aacattaaat cttaaagctt gagaataatc ttctttgact
 cagtgtcctg ccttcctgat atggaggtgg gagttgggtc cccaagtctc cccgaagccc
 cactcgcaca gctttgctgg gttcagctca tgtggcagct ctcacaggct ggagttgtgt
 gctggtggct ctaccagtct ggggtcttgg aggagaatct tgccccccat gactctgcta
 gtcattgccc tagtcaggac tctctgtagc ggccccacac ctgtgcctta actactatag
 atttattaga aacctccact ctgcctgggc cctgaggctc tccaggatat cctttgaaat
 ctaggtcttc ctggatttca aagaagtaac tatgttccct acagctcgtg cactctgtgt
 gtctgtagag ttagcaccac gtgaacactg ccgaggttta ctgctacgtc ctccagaggg
 acggcctgag ttatacctgg gcccacttga gcc
 R
 cagctagggt agccaaggag cactgcaccc aagtgtaggg agcagagaca ggaggtggcc
 ctgggcagtg acttccaatg cctcacagtg tcctgggctc ctcccccaga actgttctgc
 tctcaagacc ctgacatctg gacctgaaag atctctgaag tgcattcagg gtcattcttc
 cattttctac ccatactaat tttattaaat gttcacttgg ccacaccctt ggtattgtct
 cctgaacatg cttttgcatt ctttacaata tggtcagact gaaaattttc caaatcttta
 agttctcctt ctcttttgat tataaatttc atctttcatt tctctcttct catattttgc
 tataagcagt caagggcagc catgctgtac cctcaatact ttgcttagag atttcttcca
 ccaaatattc tatttcattg ctcataagtc tttgctccca tgaaacactt ggacatagac
 acaattcagc caagttattt gccactttgt aacaaaaaga tggcatttcc tctggtctcc
 aatgccatgc tcctcatttc tatctcagac ctcatcagaa tggcctttac tgttcatatt
 tctaccatta ttatgttcac aaccacttag ataatctctg tgaagattga aatttttggc
 cgggcgcagt ggctcacgcc tgtaatccca gcactttggg aggccgaggc aggtggatca
 tgcggtcagg agatcgagac catcctggct agcatggtga aaccccgtct ctactaaaaa
 tacaaaaaat tagctgggtg cggtggcggg cgcctgtagt cccagctact cgggaggctg
 aggcaggaga atggcgtgaa cctgggaggc ggagtgagca gagcagtgag cagagatcgt
 gccactgcac tccagcctgg gcgacagagt gagactctgt ctcaaaaaaa aaaaaaaaga
 ctgaaatttt ctacatagct ctcatcttct tctgagctct caccagaatc accttgtatg
 gcccatttgt ggaaatatag acttttttct atcccaccac ccagttccca agctactgct
 acatttttag gtatttgtta catgactccc cactctcggt accaatttct atcttagtct
 gtgcctgctg ttataacaaa ataccttaga ctgggtaatt tttgaaaaat agaaatttat
 ttctcataat ttagagggtg ggaagcccaa gatcaaggca ccagtgggtt tgatgtctag
 taagggcttg ctctctgctt ctgagatggt gtcttctcac tgtgtcctca catgatgggg
 aaggagtgaa cactatgccc tcacatcaca gaaggcaaaa gggcaaaaag ggctcacaaa
 ctcacttagg cctcttttat aaggacgcta atcccattct tgagagcaga gccctcatga
 tctaatcatc ttctggaggc ttcacctctt aatactatca ttgcattaag gattaagttt
 tatcatgaat tttggaggaa cacaacattc aaatcatagA AAtatttttc tgtaattttt
 tggtccaaca ttatgtttgt gtgagattca ttcacattga cacgagcagt cctgttttgt
 ggatttttaa ccaccattcc atattccgtt gtataataca gcacagttta tctgtcaacc
 ttttaatgga catttgagtt gttctctttt tttctttctg aattacaaat gttgggtgca
 atgtacattc ttacttgtgc atttctctgg ggcatataac taggagtaga attgccaggt
 ctgactacca cctgctttcg caattttact atgttaagtt gttcttcaca gtggtcacac
 cagtttaccc tctcatcagt aataaaagag agcttccttt gtctagcctt ctcaccaata
 tttagtgtct tcagacttaa ttgttgctaa cctgaagtat gtgaaattgc cttatgattt
 taatttgcat attccagatt

  Submitted Frequency for ss12795835 back to top
There is no frequency submission for ss12795835.


  dbSNP summary of Genotypes for ss12795835 back to top
No sufficient data to compute Hardy-weinberg probability for ss12795835.


  Submitted individual genotype for ss12795835 back to top
There is no individual genotype data for ss12795835.

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