Submitted SNP(ss) Details: ss12799822

Submitted SNP(ss) Details: ss12799822

Submitter
Handle	SC_SNP
Submitter SNP ID	NT_007299.12_18863419
RefSNP(rs#)	rs1541210
Submitted Batch ID	CHR20_NA11321_extra
Submitted Date	Nov 14, 2003
Publication Cited	[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Oct 21 2003 12:00:00:000AM

Resource Links
GenBank Accession	NT_007299
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	CHR20_NA11321
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	C/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	c/t_g

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
sequence:Chr_20-47841389e09.p1kposition:105quality:51

Fasta sequence (Legend)

 GAAAGGATTA AAGGAGACTA TATAAACAGC TATTTTTATT TATGATTAAA TAATATCTGT
 GTGGTTACTA TTTAGTCTGG GTAACTAAAT AGCTGGGTTT TTTTGTTCTT TGTACACATG
 CACATATTCC TTTTTTAAAA CAGGCATATG GGCAAATACA TTTTTTTTCT ATATGCCTCC
 ATGTTGTTTC TCTGGATTTC
 Y
 GCCAGGATGG GATGTGCCAA TTATGCACGG AATTGTTTGC GTGTCCATGG GTGCTTATAT
 AAGTCATTAT CTTTGGTGTA TGACAAATAC ACAAACTCCT GTATCTCTAG TAGCCTGTAA
 TTCCTAATTG AGGGACATGA TTGAATTTAT GTAGTTTAGC CCCAAGTAAG TAGATAAAAA
 TTATTAAGTA AATGCCCTGG

Submitted Frequency for ss12799822

There is no frequency submission for ss12799822.

dbSNP summary of Genotypes for ss12799822

No sufficient data to compute Hardy-weinberg probability for ss12799822.

Submitted individual genotype for ss12799822

There is no individual genotype data for ss12799822.

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