Submitter | Handle | SC_SNP | Submitter SNP ID | NT_007299.12_24758593 | RefSNP(rs#) | rs1334648 | Submitted Batch ID | CHR20_NA10470 | Submitted Date | Nov 17, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_007299
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR20_NA10470 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | G/A | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:20SNP45079-629a02.p1cposition:145quality:40 |
>gnl|dbSNP|ss12800332|allelePos=2000|len=4000|taxid=9606|alleles='G/A'|mol=Genomic Aatccactgt tagcataatt ggcttccctt tatgggtaac ccgacctttc tctctggctg
cccttaacat tttttttcat ttcaatgttg gttaatctga cagttatgag tcttggggtt
gctcttctcg aggagtatct ttgtgggttc tctgtatttc ctgaatttga atgttggcct
atcttgctag actggggagt ttctcctgga taatatccca aagagtgttt tccaactcga
ttccattttc tccctgtcac tttcaggtac accggtgaaa tgtaggtttg gtcttttcac
ttagtccagt atttctttga ggctttgttt gttccttttc atcctttttt cgataatctt
gtcttcatgc tttatttcat ttagttgatc ttcagtgtct gatattcttt tttccccttg
gtcgatttgg ctatttatac ttgtgtatga ttcatgaagt tcttgtgctg tgtttttcag
ttccatcagg tcatttacgt tcttctctaa actggttatt ctagttagca attcctctaa
cgtgttttca aagttcttag cttccttgca ttgggttaga acatgcttat ttcacttgga
ggagtttgtt attacccacc ttctgtagtc tacttctgtc agttcatcaa actcattctc
tgttctgttt tgttcccttg ctggcaagga gttgtgatcc tttggaggag aagaggcatt
ctggtttttg gaattttcag cctttttggg ctggtttttc ctttgttgtg gatttatcta
cctttggtct tcgatgttgg tgacctttgc atggggtttc tgtgtggaca tccttttttt
tttttttttt tttttttttt ttgatgttga tgctattcct ttctgttcat tagttttcct
tctaacagtc aggcccctct gctgcaggtc tgctggtgtt tgctggaggt ccactccaga
ccctgtttgt atgagtatta ccagcagagg ctgcagaaca acaaagattg ctgcctgttc
cttcctctgg aagcttcatc tcagaggggc acccgcaaaa tgccagtcag agctcttctg
tatgagatgt ctgttgaccc ctgctaggag ctgtctttca gtcagaaggc acaggggtca
gggacccact tgaggaggca gtctgtccct tagcagagct cgaacactgt tctggtggat
ctgctgttct ctttagagct ggcaggcagg aatatttaag tctgctgaag ctgggcccac
agccaccctt tcccccaggt gttctgtccc agtgaagtgg gagttttatc tataagcccc
tgacctgggc tgctgcctta ctttcagaga tgccctgccc agagaggagg aatctagaga
ggcagtctag ctatggtggc tttgccaagc taaggtgagc tccgcccagt ttgaacttcc
aggtggcttt gtttacactg tgatgggaaa actgcctacc caagcctcag taatggtgag
cagccttctc cccaccaagc tcaagcatcc caggtcgact tcatactgct gtgctggcag
ggagaatttc aagccagtag atcttagctt gctgggctca gtggggctgg gacctgctgt
gcttgaccat ttgtctccct ggcttcagct ccctttccag ggatgtgagc ggttttgtct
cgctagcatt ccagacacca ctgagatatg gaaaaaaact cctgcagcta gcttggtgtc
tgcccaaatg gcctcccagt tttgtgcttg aaacccaggg ccctaatggc ataggcacct
gcgggaatct cctggtctgt gggttgtgaa gactgtggga aaagtgtaga atctgggctg
gagtgcaccg ttcctcatgg cacagtccgt catggcttcc cttggctagg ggagggaatt
ccctgaaccc ttgcactttt tgggtgaggc catgcccacc ctgctttggc atgtgctcca
tggactgctc cccctgtct
R
accagtcaca atgagatgag ccgagtatct cagttggaaa cgtagaaatc acccaccttc
tgtgttgatc tcactgggag ctgcagactg gagctgtttc tattcagcca tcttgccTGA
ATATTTTTTT TTTTTTAATG tatactgatt tcctttcttt ttgggtatat acccagcagt
gggtttgctg gatcatgtgg tagctctata tttcattttt tgaggaatct acaactattc
tctgtagtgg ttgtactaaa ctgcattccc accaacagtg taatggggat cttttttcca
cacctcacca acatttgtta ttgcctgtct tttggatata agccatttta actgggatga
tataaaatct cattgtagtt ttgatttgca tttctttgat gatcaatgat gttgagacat
attcaaatac ctgtttgcca tttgtatgtc ttatttgaga aatgtgtatt caaatctttt
gcccattttt aagtcagatt attagatttc tttcttagaa agttgtttga gctcattata
tattctggtt attaatcctt tgtcagatgg gtggacttca aatattttct cctattctgt
gggttgtctc ttcacttttc tgattgtatt ctttgctgtg cagaagcttt ttaatttgat
gtgatctcat ttgttttatg cttcagttgc ctgtccttgt tgggTATTTA CTCAGTAgta
agagatgggt tctgttttct tctgcatatg gatatgtagt tttcccagca ctgtttgttg
aaaagactgt cttttcccca gtgtatgttc ctggcacatt aggtgaagat gagttcattg
tagttgtgtg gatttgtttc tgggttttct attctgttcc attggtctat gtgtctgttg
ttatgccagt accatgctgt ttttggttat tatagctctg tagtataatt cgaagtcaat
taatgtgatt ctttcagttg tgttcttttt gcttaggata gttttggtat tctgagtatt
tgtgctccca taggaatttt aggattgttt tctctattac tgtgaagaat atcattggta
ttttggtagg gattgcattg aatctgtaga ttgctttgga tagtatggac attttaacaa
tattgattct tccaatccat gaacatggaa tatctttcta ttttttggtg ttctcttaaa
tttctttcat ctgtgtttat agttttcttt gtagagatct gtcacttatt ttgcataagt
taattcctag gtattaattt tttttgtcaa tgggattact gttttgaatc ctttttcaga
ttgttcactg ttggcataca gaaatgctac tgaattttgt attttgattt ttatcctaca
actttactga atttatcagt tctaatagtt gtgtgtttaa gtctttagtt tttccaaata
tgagattata tcatctgcaa aaaagggtaa tttgacttct tcctttccca tatggatgcc
ctttatatct ttctcttgtc tgattgctct agctaggact tccagtatta tttaaataac
aatggtgaag tggacatctt tgtcatgttc cagatactag aggaaaggct ttcagatttt
tcacattcca tattacattt ggtctgtcat atatggcttt tattatgttg agggtcttcc
tactatcccc agttctttga gggtatttat catgaagtga cgttaaattt tatcaaatgc
tttgtcagca tcaattgaaa tgatcatatg gtttttatca ttcattctct tgatatgatg
gatcacattg attgatttat gtatgttgaa ccatccttcc atcccagaga taaattccac
tttgtcatga tgaatgatca ttttaatgta ttgttgaatt ctgtttgcta gtttcttgtt
gaggatcttt gcatcagtaa tagagatatt ggcctgtaat ttcttttttt tttttaaatg
tctttgtctg gtttgggtat
There is no frequency submission for ss12800332.
No sufficient data to compute Hardy-weinberg probability for ss12800332.
There is no individual genotype data for ss12800332.
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