Submitter | Handle | SC_SNP | Submitter SNP ID | NT_007299.12_22268838 | RefSNP(rs#) | rs512772 | Submitted Batch ID | CHR20_NA10470 | Submitted Date | Nov 17, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_007299
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR20_NA10470 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | T/G | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:20SNP45079-716d09.p1cposition:73quality:35 |
>gnl|dbSNP|ss12804689|allelePos=2000|len=4000|taxid=9606|alleles='T/G'|mol=Genomic tgcagtgagc cgagatcgtg ccattgcact ccagcctggg taacaagagt gaaactccat
ctcaaaaaca aacaaacaaa tacaaacaaa caaaACTCCC Aaaacaatcc aatcatactc
ttctagttat ttttaaatga ataatggcca gatgcggtag ctcatgcctg taatcccagc
actttgagag gctgaggcgg gcagatagat cacttgaggt cacgagttca agaccagcct
ggctaacatg gtgaaacccg atctctacta aaaatacaaa aattagctgg gtgtggtggt
gggcacctgt aatcctaact actctggagg ctgaggcagg agaatcactt aaacccagga
gacagaggtt gtagtgagct gagatcgtgc tgctgcacat taacctgggc gacagagcga
gattccgtct caaaaaaaaa aaaaatatat atatatatat atatttgact atagtcaccc
tgttgtgcta tcaaacacta ggttttattc attctctctc tctctctctc tctagtactc
aataatcatc tccacttgtt ccccacctgc ctactactct tcccagcctc tggtaaccat
ccttcaactc tctaagagtt caattatatt ttcgcttatg tcgctcaggc tggagtgcag
tagtgtgatc ctggctcact gcaacctctg cctcccaggt tcaagtgatt cttgtgtctc
agcctcccaa ttaactgggg ttacaggcct gtaccaccac accctgctga tttttgtatt
tttagtagag gcggggtttc accatgttcg ccaggctggt ctcgaactcc tagcctccag
tgatccacct gtcttggcct cccacagtgt tgggattaca ggcatgagcc actgcactgg
gccaattatt ttcattttta gcacccacaa ataaatgaga atatatgaag tttgtctttg
tgtctgactt atctcactta acataatgac ctccagttcc ctccatgttg ttgcaaatga
caggatctca ttctttttta tgactgaata gtacttcatt gtgtatatgt accacatgtt
ttatccaatc atctgctgat ggacatttag gttgcttcca aatcttggct attgtgaaca
gtgctgcaac aaacagcatg gcagatatct cttcaataaa ctgatttcct ttcttttggg
tatatactca gcagtgggat tgatggatca gattgtagct ctattttagt tttgtgagga
acctccaaac ttctccatag tgtttgcact gatgtacatt tctaccaaca ttgtacaagg
gtttcctttt ctccatgttg tcaccgccat ttgttattgc ctgtcttttg gataaaagcc
attttaacgg ggatgagatg atgtcttatt gtagttttga tttgcatttc gctgatgatc
aatgatattg agcacctttt catatgcctg cttgccattt gtatgtcttt ttttcaaaaa
tgtttattca aatattttgc ccatttaaaa tctgattatt agattttttt tcctatggag
ttgtttaagc tcctaatgta ttctggttat cttgtcagat ggttagtttg ccaatatttt
ccctcattcg gtgagttgtt tctttgcttt attttttcct tcactgtgca gaagcttttt
aacttgatgt gatcccattt gtccattttt gctatggttg cctgtgttgt ggggtactat
tcaagaattt tttgcccaag ccaatgtttc atagtttgag gtcttagatt taagtcttta
attcattttg gtttggattt tgtatatggt gataagtagg ggtctagttt cattattctg
catatggata tccagttttc cagtaccatt tatagaagag actgtctttt ccccaatgta
tatttttggc atctttgttg aaaataagcg cactgtagat gcagggattt atttctgggt
tctctattct gttccattg
K
tctatgtgtc tgtttttata ccagtcccat gctgttttgg ttactatagg tgtgtagtat
aatttgaagt caggtaatgt gatttctcct gttttgttct ttttgctcag tatagctttg
gctatttggg gtcttttgtg gttctgtata aattttagga ttgatttttc tatttctgtg
aaggatgtta ttggtatttt gataagtatt gcattaaatc tgtagattgg tttggatagt
atgtacattt taacaatatt gattcttccg attcatgaac atggactgtc tttagatttt
ttgtgtgtcc tcttcaattt ttttcatcgg gttttatcgt ttttattgta gagatctttc
acttctttgg ttaattctta ggtacttaat tttattttgt ggctattgca catgggatta
ctttttttat ttctttttca gattgttcac tcttggcata tagcattgcc actagttttt
gtgtgttcat tttgtatcct gcagctttac tgaatttgtt tatcaattcg aatatgtttc
tggtggaatc ttcaggtttt tccatgtata agatcatatt atctgaaaac aaggataatt
tgacttcttc ctttccaact tggatgccct ttatttcttt gccttgtctg attgctctag
ctagaacttc cagtgccata ttaaataata gtggtgaaag tagcattctt gtcttgttcc
agatctaaga ggaaaggctt agtttttccc tattcagtaa gatactagtt gtgggtctgt
cgtaaatgga ttttattgtg ttgaggtatg ttccttctat gcctagtttg ttagggtttt
tatcatgaag ggatgttgaa ctttatcaaa tgctttttca atatcaattg aaatgatcat
atggttttta atccttcatt ctgttgatat gatgtatcac aatgattgat ttgtgtagac
tgaaccgtaa ttggcatctc tgagataaat cccacttggt catgatgact aatctttcta
atgtattgtt gaattcagtt tgatagtatt ttgttgagga tttttgaatt aatatccatc
tcatgtattg gcctgtagtt ttcttttatt gatgtatctt tgtctcattt tggtatcagg
gtaatattgg cctcagagaa tgagtttggc agtattctct tctcctctgt ttttcagaat
attttgagta ggattggtat taattcttta aatgtttggt ataattcaac agtgaagcta
ttggatcctg ggattttctg tactgagaga tttttcatta cagttttaat ctcactattt
gttatgggtc tgtttaggtt ttggatttcc tcatggttca atcttggtag attgtgtgag
tttaggaaat tatacatttc ctctagattt tcaaattttt tagattgtat gaatttagga
aattatacat ttcctctaga ttagcaattt tttcatatag ttgttcatag tagccactaa
tgatcctttg aatttctgca gtatcagttg caatgtcttc tttttcatct ttgattttat
ttatttggat cttctctttc tttttttctt agttagcctg gctaaccatt tctcaatttt
gttaatttaa aaaaaatttt taattcatta atttctgctc tggtctttct ttcttttctt
gtactaaatt tatggtttgg ttttctcttg cttttctagt tccctggtct ttattttgta
ctaacttttt gatttggttt ggtttgctct ttcttgtcta gctctctggt ctttattatt
tattttcttg tgctaacttt ttggtttggt ttgcttttgc ttttctagtt ctttaagatg
cattgttagg ttatttattt gaattttttc tcctttagtg atgtagacac ttaaaaattt
ttttcttatt actgcttttg gtgtatccca taggttttga tatgttatgt tttcactgta
atttctttca agaaattttt
There is no frequency submission for ss12804689.
No sufficient data to compute Hardy-weinberg probability for ss12804689.
There is no individual genotype data for ss12804689.
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