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Submitted SNP(ss) Details: ss12804689           
Submitter
HandleSC_SNP
Submitter SNP IDNT_007299.12_22268838
RefSNP(rs#)rs512772
Submitted Batch IDCHR20_NA10470
Submitted DateNov 17, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 21 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA10470
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP45079-716d09.p1cposition:73quality:35

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12804689|allelePos=2000|len=4000|taxid=9606|alleles='T/G'|mol=Genomic
 tgcagtgagc cgagatcgtg ccattgcact ccagcctggg taacaagagt gaaactccat
 ctcaaaaaca aacaaacaaa tacaaacaaa caaaACTCCC Aaaacaatcc aatcatactc
 ttctagttat ttttaaatga ataatggcca gatgcggtag ctcatgcctg taatcccagc
 actttgagag gctgaggcgg gcagatagat cacttgaggt cacgagttca agaccagcct
 ggctaacatg gtgaaacccg atctctacta aaaatacaaa aattagctgg gtgtggtggt
 gggcacctgt aatcctaact actctggagg ctgaggcagg agaatcactt aaacccagga
 gacagaggtt gtagtgagct gagatcgtgc tgctgcacat taacctgggc gacagagcga
 gattccgtct caaaaaaaaa aaaaatatat atatatatat atatttgact atagtcaccc
 tgttgtgcta tcaaacacta ggttttattc attctctctc tctctctctc tctagtactc
 aataatcatc tccacttgtt ccccacctgc ctactactct tcccagcctc tggtaaccat
 ccttcaactc tctaagagtt caattatatt ttcgcttatg tcgctcaggc tggagtgcag
 tagtgtgatc ctggctcact gcaacctctg cctcccaggt tcaagtgatt cttgtgtctc
 agcctcccaa ttaactgggg ttacaggcct gtaccaccac accctgctga tttttgtatt
 tttagtagag gcggggtttc accatgttcg ccaggctggt ctcgaactcc tagcctccag
 tgatccacct gtcttggcct cccacagtgt tgggattaca ggcatgagcc actgcactgg
 gccaattatt ttcattttta gcacccacaa ataaatgaga atatatgaag tttgtctttg
 tgtctgactt atctcactta acataatgac ctccagttcc ctccatgttg ttgcaaatga
 caggatctca ttctttttta tgactgaata gtacttcatt gtgtatatgt accacatgtt
 ttatccaatc atctgctgat ggacatttag gttgcttcca aatcttggct attgtgaaca
 gtgctgcaac aaacagcatg gcagatatct cttcaataaa ctgatttcct ttcttttggg
 tatatactca gcagtgggat tgatggatca gattgtagct ctattttagt tttgtgagga
 acctccaaac ttctccatag tgtttgcact gatgtacatt tctaccaaca ttgtacaagg
 gtttcctttt ctccatgttg tcaccgccat ttgttattgc ctgtcttttg gataaaagcc
 attttaacgg ggatgagatg atgtcttatt gtagttttga tttgcatttc gctgatgatc
 aatgatattg agcacctttt catatgcctg cttgccattt gtatgtcttt ttttcaaaaa
 tgtttattca aatattttgc ccatttaaaa tctgattatt agattttttt tcctatggag
 ttgtttaagc tcctaatgta ttctggttat cttgtcagat ggttagtttg ccaatatttt
 ccctcattcg gtgagttgtt tctttgcttt attttttcct tcactgtgca gaagcttttt
 aacttgatgt gatcccattt gtccattttt gctatggttg cctgtgttgt ggggtactat
 tcaagaattt tttgcccaag ccaatgtttc atagtttgag gtcttagatt taagtcttta
 attcattttg gtttggattt tgtatatggt gataagtagg ggtctagttt cattattctg
 catatggata tccagttttc cagtaccatt tatagaagag actgtctttt ccccaatgta
 tatttttggc atctttgttg aaaataagcg cactgtagat gcagggattt atttctgggt
 tctctattct gttccattg
 K
 tctatgtgtc tgtttttata ccagtcccat gctgttttgg ttactatagg tgtgtagtat
 aatttgaagt caggtaatgt gatttctcct gttttgttct ttttgctcag tatagctttg
 gctatttggg gtcttttgtg gttctgtata aattttagga ttgatttttc tatttctgtg
 aaggatgtta ttggtatttt gataagtatt gcattaaatc tgtagattgg tttggatagt
 atgtacattt taacaatatt gattcttccg attcatgaac atggactgtc tttagatttt
 ttgtgtgtcc tcttcaattt ttttcatcgg gttttatcgt ttttattgta gagatctttc
 acttctttgg ttaattctta ggtacttaat tttattttgt ggctattgca catgggatta
 ctttttttat ttctttttca gattgttcac tcttggcata tagcattgcc actagttttt
 gtgtgttcat tttgtatcct gcagctttac tgaatttgtt tatcaattcg aatatgtttc
 tggtggaatc ttcaggtttt tccatgtata agatcatatt atctgaaaac aaggataatt
 tgacttcttc ctttccaact tggatgccct ttatttcttt gccttgtctg attgctctag
 ctagaacttc cagtgccata ttaaataata gtggtgaaag tagcattctt gtcttgttcc
 agatctaaga ggaaaggctt agtttttccc tattcagtaa gatactagtt gtgggtctgt
 cgtaaatgga ttttattgtg ttgaggtatg ttccttctat gcctagtttg ttagggtttt
 tatcatgaag ggatgttgaa ctttatcaaa tgctttttca atatcaattg aaatgatcat
 atggttttta atccttcatt ctgttgatat gatgtatcac aatgattgat ttgtgtagac
 tgaaccgtaa ttggcatctc tgagataaat cccacttggt catgatgact aatctttcta
 atgtattgtt gaattcagtt tgatagtatt ttgttgagga tttttgaatt aatatccatc
 tcatgtattg gcctgtagtt ttcttttatt gatgtatctt tgtctcattt tggtatcagg
 gtaatattgg cctcagagaa tgagtttggc agtattctct tctcctctgt ttttcagaat
 attttgagta ggattggtat taattcttta aatgtttggt ataattcaac agtgaagcta
 ttggatcctg ggattttctg tactgagaga tttttcatta cagttttaat ctcactattt
 gttatgggtc tgtttaggtt ttggatttcc tcatggttca atcttggtag attgtgtgag
 tttaggaaat tatacatttc ctctagattt tcaaattttt tagattgtat gaatttagga
 aattatacat ttcctctaga ttagcaattt tttcatatag ttgttcatag tagccactaa
 tgatcctttg aatttctgca gtatcagttg caatgtcttc tttttcatct ttgattttat
 ttatttggat cttctctttc tttttttctt agttagcctg gctaaccatt tctcaatttt
 gttaatttaa aaaaaatttt taattcatta atttctgctc tggtctttct ttcttttctt
 gtactaaatt tatggtttgg ttttctcttg cttttctagt tccctggtct ttattttgta
 ctaacttttt gatttggttt ggtttgctct ttcttgtcta gctctctggt ctttattatt
 tattttcttg tgctaacttt ttggtttggt ttgcttttgc ttttctagtt ctttaagatg
 cattgttagg ttatttattt gaattttttc tcctttagtg atgtagacac ttaaaaattt
 ttttcttatt actgcttttg gtgtatccca taggttttga tatgttatgt tttcactgta
 atttctttca agaaattttt

  Submitted Frequency for ss12804689 back to top
There is no frequency submission for ss12804689.


  dbSNP summary of Genotypes for ss12804689 back to top
No sufficient data to compute Hardy-weinberg probability for ss12804689.


  Submitted individual genotype for ss12804689 back to top
There is no individual genotype data for ss12804689.

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