| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_007299.12_4350242 | | RefSNP(rs#) | rs1938058 | | Submitted Batch ID | CHR20_NA17119_extra | | Submitted Date | Nov 14, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_007299
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA17119 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | T/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:20SNP45080-801e05.p1cposition:407quality:27 |
>gnl|dbSNP|ss12820050|allelePos=201|len=2201|taxid=9606|alleles='T/C'|mol=Genomic ACAGAAACAG CAACAATACC TAATATTTTT GAAATCTATT GTGTACTGGA TGGCTTTAAA
TAGATTATGT CATTTGTTAA AAATAGCATA ATTAGGAATG CTCTATTATT ATCTATATTT
TATTTGTAGT GTGTTTAATA GTTTAATTTA GAACGAGCAT TATGATGAGA TGAGTGAGGC
AAGGTTAGGA AGTAAAAGGC
Y
AGATCTTGTT GCTATTTAAA AACTTGGTAT CAATGACTTT CTTCACCaaa tagcatggtg
ctgccataaa aacagacaca tggaccaatg aaatagaata tagaacccag aagcaaatcc
atacatctac agtgaacaca ttttcaacaa aggtccccca acatatactg cggaaatgca
gtcttttcaa taaacagtgc tgggaaaact ggatatccat atgcagaaaa atgaagttag
tcccctacct ctcgccatat acaaaaatca aatcaaaatg gattaaaaac ttaagtataa
gacctcaaac tatgaaagta ctacaagaaa acattgggga agctcttcag gacattggat
tgggcaacaa tttattgata ataccccaca aacacagaca accaaagcaa aatggacaaa
tgggatcaca tcaagttaaa aagcttctgc acagcaaaga aatcattcag caaagagaag
aaacaaccca caaaatggga gaaaatattt gcaaactata cattggacaa gggattaata
tccaaaatat atgaggagct caaacaattc tataggaaag tatccaataa tctgctttaa
aaatgggcaa atgatctgaa tagccacttc tcaaaagaag acatacagat ggcaaacaag
tgtataagaa agtgctcaac atcattgact atcatagaaa aataactaga aactaatgag
atatcatctc actcctgtta aaatggcttt tatccaaaat acaggcaata acaaatgcta
gagagagtgt ggagaaaaag taaccctctt acgctgttgg tggggatgtc aattagtaca
accactatag agaagagttt ggagattcct caaaaaacta aaaatagaac taccctattg
tattagttta ttcttgctat aagaaatacc caagcctagg aaatttataa agaaaagaga
tttaattggt tcacagtttt gcaggctgta caggaagcat agcagcttct gtttctgggg
aggcctcaga aagcacccaa tcatgaccga gggcaaagcg ggagcaagac agttcacatg
gctgtaatag gagaaagaga gagaaggggg aggtgccaca tacttttaaa ctaccagatc
tcacgagaat tcactattgc cacaactgca ccaagaggct aaatcataag aaactgcccc
catgatccaa tcacctccta ccaggtccta ttccaacatt gaggattaaa attcaacaag
agatttgggt agggcacaca gatcaaacca tatcacatat gatccagtaa tcctactgct
agggatatac tcaaaacaaa gaaaactagt atattaaaga gatatctgaa ctcacatgtt
tactgcagca ttgttaacaa tagtcaagat ttggaagtaa cctgagtcca tcaacagaca
aatggataag gaaaatgtgg tacatatacc aatggagtac tattcagcca ttaaaaagga
tgagattcag tcatttgcaa aaacatggat ggagctagag gtcattatgt taagtaaaat
aagccaggca cagaaagatg aacttcacat agtctcactt atttgtgggt gctaaaaatt
tgaacaattg aactcatgga gatagagagt aggatggtta ccagaggctg agaagcgtag
tgggagtggg gggaagtggg gatggttaaa tggttaatgg atacaaaaat atacttagat
aaaatgaata cgatacagta tttgatagca caagagggtg actataatca acagtaattt
gttgttgttg ttgttgttgt tttgttTTGT Attttttttt tgagacagag tttcactctt
gtcatccagt ctggagtgca atgacatgat ctgggctcac ggcaacctct gcctcccagg
ttccagtgat tctcctgcct cagcctccca agtagctggg attacaggtg cccaccacca
cacctggcta attttATTGT
There is no frequency submission for ss12820050.
No sufficient data to compute Hardy-weinberg probability for ss12820050.
There is no individual genotype data for ss12820050.
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