| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_007592.13_17877826 | | RefSNP(rs#) | rs6456766 | | Submitted Batch ID | CHR20_NA17119_extra | | Submitted Date | Nov 14, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_007592
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA17119 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | G/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c_g/a |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:20SNP45080-218g01.p1cposition:-165quality:38 |
>gnl|dbSNP|ss12837491|allelePos=873|len=2425|taxid=9606|alleles='G/A'|mol=Genomic TGTTGTAATT CTCACAAGAG CAAGTATATC TGTAGAATCA AGGCCTAGAA GAGAAACTCT
GGATCCAAAG AATAAATACA CTAGTAATTT TGGTAACATT TACCAAATAG TTTTCTTTTA
CTCTGCCACT GGAAGAGTTG TTGTGAAAGA CAAACATTAG AATTAAAGAT GTTTGCagct
gggtgcagtg gctcttacct gtaatcccag cactttgaga agccgaggca agcgaatcac
ttgaggtcag gagtttgaga ccatcccagc caacatggtg aaaccctatc tctactaaaa
acacaaaaaa ttagcctggc gtggtggtgt gcgcatgtaa tctcacctac tcagggggga
tgaggcagga taattgcttg aacccgagag gcggaggttg cagtgagcca agatggcacA
ATTTGCCCTA Aacctacatg cagaagaatg aaattagacc ctcatctcac accgtataca
aaaatcaact caaaatgagt gaaaaagctt aaatgtaaga cctgaagctg taaaactact
agaagaaaac agggggaaag ctccatgaca tggatctgag caatgatttt ttggacatga
cttcaaaatc acaggcaaac aaaagcaaaa attaaaacgt atgattatgt taaatcaaaa
agcttctgca cagccaaggg aataataaag aaacaatcta tggaatggga gaatatattt
gcaaaccata catctgataa ggggttaatg tacaaaatat ataaggaact cgaacaactc
aatgttaaga aaacaagaac ctaattaaaa agtaggcaaa gaacctgaat agacatttct
caaaagaaga catacaaatg gacaacaggt ac
R
tgaaaaaatg ctcaacatca ctaatcatga gggaaaggca aattaaaacc ataatgaaaa
actacctcac acttgttaga acagctgtta taaaaaagac agaagataac aagtgttgga
gagaatatgg agaaaagaga aatcttgtac actctctgtg gaatgaaaat tagtacagcc
gtttcagaaa acagtatgga gattacacaa aaaattaaaa atagaactat catatgatct
agcaatccca ctattgggta tacagtcaaa ggaaatgaaa tcagtatact gaagagatat
ctgcattctc atgtttattg cagcgttatt caaaactcgt gcaggaatgt tcacagcagt
tttatttgga atagccaaaa ctgaaaacaa tcataatgtc tcttaatagg tgagtggtaa
aacataatgt ggcaatttgt acaatggagt actattcagc cataaaaaat taaacattga
tacattcaac aatttagata gatcttgagg gcattatgct tgtagcagga cgagcctcag
ataaaacctc tcagacaccg agtagtagaa ggaagggttt tattcagctg ggagcatcgg
caagctactg ccttaaaatc cgagctccct gaatgcacaa tttctgtccc ttttaagggc
tcacaacact aaagctttca catgaaaggg ttgtgactga tttgagcaat caggcagtac
gtgacagggg ctgcatgcac cggtggtcag agagaaacag aacagggcag ggagtttcac
aatgttcttc tatacaatgt ctggaatcta tgaataacat tggtttctaa gttatgagtt
gatttttaac tactgggttt aggccaggca ggcccaggcc tggttttggg cctggcgccg
ggctgcctgt ctttggtttt acttccttgt tgttttttct taaaacaggt actgggtata
aaataatata aaacaatatg agagggtctc tctcttccct catgctgagt ggaaaaaaat
ctctgaagtt cacatactgt atgattttat atatgtatgt gtttatatat ttcatataca
cgtacaaata catgacaaca TTTGTATACA TATACAgaca aaattgcagt gatgtaaaac
agattagcga ttgccgggga ttataaatga tgggtatagg gaggatacga ggttaggagg
tggacgtaaa tataaaggga tatcagaagg gagatttttg tggtgatgga ataattattt
atattgatca taatggagtt tgtacaaatc taaacattat taaacggctt agaactatac
atatacacac TAGTaatggc aatttcctgg ttttgttatt gtactttagt tatgtaaaat
gtgaccatgc aggtaaacat gggGtctctg tacaaacttt gcaacttcct tgaatctata
attatatcaa aataaTAGTA AAAGAAACAA GTTTGAAAAT GTAGGTAGTT ATTGAAGCAT
GCCTGATGTG TACTAGACGG GCATCTGACT GTTCTTTATA GCTCTGCGTG TG
There is no frequency submission for ss12837491.
No sufficient data to compute Hardy-weinberg probability for ss12837491.
There is no individual genotype data for ss12837491.
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