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Submitted SNP(ss) Details: ss1289335450           
Submitter
Handle1000GENOMES
Submitter SNP IDPHASE3_V1_15
RefSNP(rs#)rs574746232
Submitted Batch IDPhase3_V1
Submitted DateAug 16, 2014
Publication CitedN.D.
First entry to dbSNPAug 16 2014 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodSEQ
Ascertainment Samplesize5008
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 5
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1289335450|allelePos=26|len=51|taxid=9606|alleles='T/G'|mol=Genomic
 GGCCAGGGGC CCCCAAGAAA GGCTC
 K
 GGTGGAGAAC CTGTGCATGA AGGCT

  Submitted Frequency for ss1289335450 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
AMR694T=1.00000000
G=0.00000000
Phase3_V1-AMR1000GENOMES
AFR1322T=0.99769998
G=0.00230000
Phase3_V1-AFR1000GENOMES
EAS1008T=1.00000000
G=0.00000000
Phase3_V1-EAS1000GENOMES
SAS978T=1.00000000
G=0.00000000
Phase3_V1-SAS1000GENOMES
EUR1006T=1.00000000
G=0.00000000
Phase3_V1-EUR1000GENOMES


  dbSNP summary of Genotypes for ss1289335450 back to top
No sufficient data to compute Hardy-weinberg probability for ss1289335450.


  Submitted individual genotype for ss1289335450 back to top
There is no individual genotype data for ss1289335450.