| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_008413.15_10121310 | | RefSNP(rs#) | rs291306 | | Submitted Batch ID | CHR9_Overlap_SNPs | | Submitted Date | Oct 21, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_008413
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR9_OVERLAP_SNPS | | Ascertainment Samplesize | 8 | | Population | N.D. |
| | Allele | | Observed Allele | T/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:9bA19G1-112c08.q1cposition:151quality:50sequence:9bA19G1-117e03.q1cposition:232quality:56sequence:9bA19G1-124b07.q1cposition:-584quality:28sequence:9bA19G1-121g06.p1cposition:-165quality:40sequence:9bA19G1-124d07.p1cposition:430quality:42sequence:9bA19G1-127g06.q1cposition:-444quality:56sequence:9bA19G1-127g06.p1cposition:378quality:45 |
>gnl|dbSNP|ss12923382|allelePos=201|len=401|taxid=9606|alleles='T/A'|mol=Genomic AAACTGGCTG TGCTTTCTGG GAGGAATAAA GAGAGTGAGG ATGGAGCAAA TCTCTAAGAA
AAACAATTGC TGTGTTTTAA TTTTGGCCAC CTGATGTTAC TGTCTAACAG CAATTAGAGA
GTCAAAGCTC TGAGATGAAA GACTACTGCG TGCATCTCTA AGTTCTGTCC CTTAGACACT
AGATACCATA GTGTAACTTT
W
ATGCATCAGC ATCCTTCTCC GTAGAATGGG AACAATTGCA GTAGTTCAGT GCACTATTTC
AACAAAGTAA GAGAGTATTC AACCATTCCA CATAAAGCCT GTATTGTCAA GTGCTTAACA
AATATTGTTT ATTATTTTCA GTCTTTGAAG TATGTCTAAG ATGCCACATT CAGGGTTGAA
TAAGGAAAAT AAATGTAAAA
There is no frequency submission for ss12923382.
No sufficient data to compute Hardy-weinberg probability for ss12923382.
There is no individual genotype data for ss12923382.
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