Submitter | Handle | SC_SNP | Submitter SNP ID | NT_008413.15_10187358 | RefSNP(rs#) | rs294828 | Submitted Batch ID | CHR9_Overlap_SNPs | Submitted Date | Oct 21, 2003 | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_008413
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR9_OVERLAP_SNPS | Ascertainment Samplesize | 7 | Population | N.D. |
| Allele | Observed Allele | G/A | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence:9bA321D10-38d01.p1cposition:149quality:35sequence:9bA321D10-37e09.p1cposition:-315quality:39sequence:9bA321D10-38e12.q1cposition:-540quality:27sequence:9bA321D10-20a10.p1cposition:-236quality:40sequence:9bA321D10-22c12.p1cposition:517quality:32sequence:9bA321D10-25g03.q1cposition:460quality:46 |
>gnl|dbSNP|ss12923384|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic AGACTGCCAC TCTGCACCCC CACCCCACCA CTCCCTTTTG GCTCTAGCCT GACCTTTCCT
CTTTTGATGC ATTCTGTTTA TGATAACTTA CTTTTACTTT GGATAAGACA GAGAATCTAA
TTATAAATTT AGTCAATGAG AAAACTGGGT AGGAATTAAA CTGAGTTTAA AATATGACAG
CAGCCATGTA TACCGAGGAT
R
TGAATGGATT CCAACAGAAT AGAAATGTGA GATCATTCCC TTTAATAGAA TTGCTTTCCT
TTCTCTTACA AGACATTAAA AACTTTGCTT GGACAATGCA ACAGGAGGCA TTACTCCCTA
TATAATTTTA TCATATTTTT CCTCTTAGCA AATTCATGCT TTACTTATTA CAGGGAACTA
TATCTCTGTA AGAAATAAGA
There is no frequency submission for ss12923384.
No sufficient data to compute Hardy-weinberg probability for ss12923384.
There is no individual genotype data for ss12923384.
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