| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_008413.15_10190624 | | RefSNP(rs#) | rs294819 | | Submitted Batch ID | CHR9_Overlap_SNPs | | Submitted Date | Oct 21, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_008413
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR9_OVERLAP_SNPS | | Ascertainment Samplesize | 12 | | Population | N.D. |
| | Allele | | Observed Allele | G/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:9bA321D10-29b03.q1cposition:361quality:44sequence:9bA321D10-37d08.q1cposition:132quality:42sequence:9bA321D10-37h07.q1cposition:173quality:43sequence:9bA321D10-23f02.p1cposition:252quality:51sequence:9bA321D10-37c11.q1cposition:248quality:44sequence:9bA321D10-24a10.q1cposition:326quality:42sequence:9bA321D10-33h09.q1cposition:-135quality:42sequence:9bA321D10-27f08.p1cposition:-99quality:37sequence:S9A_2-20f23.p1kposition:-410quality:32sequence:9bA321D10-36h10.p1cposition:298quality:42sequence:9bA321D10-22c10.p1cposition:-75quality:29 |
>gnl|dbSNP|ss12923386|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic tgctgctaaa cattaaacaa ggcataagac agtccccaag aagaaagaat tatctaggcc
aaaatattaa tagtgcagtt gaaaaacGAA ATGCTAGATG TTTACATCAT TTAAGAAAGA
GAAGACCATA TGACTGACTA CCTTTCATGG CTATCCAGTT ACATTACAAC AAAGGAAACA
CATTAACAGA GTTTCTCAAG
R
AGGCAAATAA ACAGAATCAC AAAGACATAT TCTCAAGGGG AGTTATTGCA GAAAGGACTT
AGAAGTAAAC AGTTACAATC ATGCAGAGGA AGGGGATGAA AAACATTTGC AGAATGTTAT
AGCTAAGATG CTACTTATTT GTTCAATTTA TTGGTAGAAT TTTACCTGAG GAAAAATATA
AACATAAATT GATGTCAATT
There is no frequency submission for ss12923386.
No sufficient data to compute Hardy-weinberg probability for ss12923386.
There is no individual genotype data for ss12923386.
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