| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_008413.15_10195581 | | RefSNP(rs#) | rs1070130 | | Submitted Batch ID | CHR9_Overlap_SNPs | | Submitted Date | Oct 21, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_008413
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR9_OVERLAP_SNPS | | Ascertainment Samplesize | 16 | | Population | N.D. |
| | Allele | | Observed Allele | G/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:9bA321D10-14d04.p1cposition:260quality:56sequence:9bA321D10-16c06.p1cposition:523quality:24sequence:9bA321D10-35a09.p1cposition:485quality:38sequence:9bA321D10-22f12.p1cposition:229quality:42sequence:9bA321D10-11d06.q1cposition:197quality:40sequence:9bA321D10-37h04.p1cposition:-445quality:42sequence:9bA321D10-32e12.q1cposition:-695quality:26sequence:9bA321D10-30f06.p1cposition:351quality:56sequence:9bA321D10-22a04.p1cposition:-600quality:28sequence:9bA321D10-18a11.q1cposition:-299quality:45sequence:9bA321D10-14d04.q1cposition:-186quality:51sequence:9bA321D10-26d12.p1cposition:530quality:28sequence:9bA321D10-22c02.p1cposition:-150quality:40sequence:9bA321D10-20e11.q1cposition:-240quality:41sequence:9bA321D10-30f03.p1cposition:-245quality:43 |
>gnl|dbSNP|ss12923394|allelePos=313|len=594|taxid=9606|alleles='G/A'|mol=Genomic TTATGTAACA TAAATGAACA GAAAATTTGA AAAGGTGAGA TATATTAATT TAATAAAGTT
GTGAAAGATT CCTTTTTGTG GCCACAATTC TTCTTCTTCt ttattttatt ttattttatt
ttattttatt ttattttatt ttactctatt ttCCtgagac agagtcttac tctgttgccc
aggctggagt gcagtggcct gatcttggct cactgcaacc tccacctccc agattcaagt
gattctcctg ccacagcctc tgaagtagct gagattacag gtgtaagcca ccacaccagc
ctaatttttt at
R
tgtttagtaa agacagtgtt tccctatgtt gttcaggctg gtcttgaact ccagacctca
aatgatccgc ctgccttggc cccaaagtgc tgggattaca ggcatgagcc accatgcccg
gccTGCTTCA TCAGCCTAAA TAATAGCAAT ACAGTCATTG GTAATTGATT TGaaataata
tatatctaga attttaaagt aattcaacta ttttataata attttaaatG AAATGTGATA
CTATAACTTT AAAAATAGGG TTAACTGCAT TATTCACTTT G
There is no frequency submission for ss12923394.
No sufficient data to compute Hardy-weinberg probability for ss12923394.
There is no individual genotype data for ss12923394.
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