| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_008413.15_10197052 | | RefSNP(rs#) | rs294804 | | Submitted Batch ID | CHR9_Overlap_SNPs | | Submitted Date | Oct 21, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_008413
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR9_OVERLAP_SNPS | | Ascertainment Samplesize | 17 | | Population | N.D. |
| | Allele | | Observed Allele | T/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:9bA321D10-20g11.p1cposition:475quality:26sequence:9bA321D10-18a11.p1cposition:347quality:44sequence:9bA321D10-11e07.p1cposition:205quality:44sequence:9bA321D10-19e01.q1cposition:411quality:40sequence:9bA321D10-19f12.q1cposition:391quality:50sequence:9bA321D10-24b04.p1cposition:387quality:56sequence:9bA321D10-37c10.q1cposition:568quality:42sequence:9bA321D10-30h10.q1cposition:415quality:41sequence:9bA321D10-16c05.q1cposition:-340quality:40sequence:9bA321D10-17g06.q1cposition:238quality:46sequence:9bA321D10-22c02.q1cposition:393quality:38sequence:9bA321D10-25f07.q1cposition:-404quality:45sequence:9bA321D10-37h11.q1cposition:-421quality:45sequence:9bA321D10-29c03.p1cposition:561quality:25sequence:9bA321D10-27e12.q1cposition:-153quality:40sequence:9bA321D10-28a10.q1cposition:112quality:44 |
>gnl|dbSNP|ss12923395|allelePos=201|len=744|taxid=9606|alleles='T/C'|mol=Genomic CTGAGTGTAA CTCAGACTAG AAACCAAGAA AACACATACC AATAAATACT GGAGCATATC
ATCACAATGT AAAAATTATC AGATTTGCAT ATTGTTCAGT TATGAACAAC ATTATAAAAA
TTCATTTTGT AAAACTGAGG TCAAATGTAT ACAGAGGGAA ATAATGCACC AAACTTAAGT
ATATGAGCTG ATGAGTTTTA
Y
TGTATTCATC ATCTATCTAT ATCTCTATAT GTgtataatt atcacttcaa acaagatata
gaatataccc agcatcccaa acagttcttt tatgctcctt cctggacaaa gaccacttct
tttcctcact ccataagaaa ttacacatct aatttttccc actttagatt tgttttcttt
tcttgaactt ttacagttat agataatgca tttttttgtc tgatctcttt aattcagcat
aacatttttg agctttatgg ttttgtatat atcaacagtt aattctttct ctgcatttat
gttcatgaga gacattggtc tgtaatttca ttttcttcta atgttattta tcaggtatta
attggtatta gggttatgct ggcatcataa aaataactag aaagggttca ctctttcccc
actattttct aaaaatattt tgtgtagaac tggtattaat tctttctaaa atatATAATG
CACTAATAAA AATATTATTA TGTAACTAAA TAGTAATTGT ATTCTAATGA AAATATTAGC
CCC
There is no frequency submission for ss12923395.
No sufficient data to compute Hardy-weinberg probability for ss12923395.
There is no individual genotype data for ss12923395.
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