| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_008413.15_101973 | | RefSNP(rs#) | rs4740977 | | Submitted Batch ID | CHR9_Overlap_SNPs | | Submitted Date | Oct 21, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_008413
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR9_OVERLAP_SNPS | | Ascertainment Samplesize | 13 | | Population | N.D. |
| | Allele | | Observed Allele | G/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 1 | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:9bB354N4-18a01.p1cposition:190quality:35sequence:9bB354N4-3e04.p1cposition:365quality:30sequence:9bB354N4-49b04.p1kposition:550quality:35sequence:9bB354N4-5d01.q1cposition:217quality:38sequence:9bB354N4-16g06.p1cposition:-334quality:56sequence:9bB354N4-14e09.q1cposition:211quality:35sequence:9bB354N4-6b08.p1cposition:186quality:50sequence:9bB354N4-11d06.p1cposition:-645quality:40sequence:9bB354N4-64f08.q1kwposition:-291quality:28sequence:9bB354N4-12a12.p1cposition:359quality:35sequence:9bB354N4-53a11.p1kposition:-683quality:27sequence:9bB354N4-49c01.q1kposition:-506quality:27 |
>gnl|dbSNP|ss12923396|allelePos=508|len=743|taxid=9606|alleles='G/A'|mol=Genomic CTCCCTCTAC AAACAATATT ATTATTTGCC AATATTCAAA AGTCTGAATA AACGACCTTA
TCCCTGGGAA TATCTTGCCA AAAAACTATT ACCTGCAGCT Acaaagtcca gaatgtcaac
ttcttcagaa caaaccgttc agtttctccc ataaaaaatg caagggaaac aaaaaaagag
gattgaggaa atctaaaaga gatataatag cccatatcaa ccaaacacaa tacgtaaccc
ttattagcat tctaattcaa accgaccaac taaacaaaaa gtttttagac aattgaagat
atttaaatat tgcctggata aaccgatgct attaatggat tatttaggtg tgataatggt
attgtggtta cgttgatggg aatcttcttt tttataaatg gggtcttgct atgttgctca
gggtggtctt gaactcctgg cctaaagtga tcctccaacc tctgcctccc aaagagctgg
gattacaggg aggagccact gcaccca
R
tctcattgat ggaattatta tcttttagag aaatattcaa aaatacaata caatgataga
ctatctggga tttgattcaa aataattcag tggggagagg actgtcagca gataaagaag
acacaaggtt ggccCAGAGG AGAAGTACAC ACAGGTTAAT TATACTAATC TCTTTATAAA
CATTGTTTGA AATATGACAT AATGTATCCT ATACAACTGA TACCTTGAGT AACAC
There is no frequency submission for ss12923396.
No sufficient data to compute Hardy-weinberg probability for ss12923396.
There is no individual genotype data for ss12923396.
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