| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_008413.15_10198313 | | RefSNP(rs#) | rs294801 | | Submitted Batch ID | CHR9_Overlap_SNPs | | Submitted Date | Oct 21, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_008413
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR9_OVERLAP_SNPS | | Ascertainment Samplesize | 8 | | Population | N.D. |
| | Allele | | Observed Allele | C/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:S9A_2-176i20.p1kposition:529quality:46sequence:9bA321D10-26b10.p1cposition:-248quality:32sequence:9bA321D10-18d10.q1cposition:-370quality:29sequence:9bA321D10-20b04.p1cposition:332quality:45sequence:9bA321D10-17d03.q1cposition:476quality:27sequence:9bA321D10-26f02.q1cposition:439quality:42sequence:9bA321D10-32f05.p1cposition:-284quality:45 |
>gnl|dbSNP|ss12923398|allelePos=201|len=514|taxid=9606|alleles='C/G'|mol=Genomic TATGTAATGA GGACTTTGCT GTTAAAGTCT TCTCTGGGAA ACACTTGTGT TACCTCGTAA
TTTATCATAA ACTCTATTTG ATATTCTGCA TCTGGTAGTG AGGTATAAGA CTGAAACCGC
ggcggggcgc ggtggctcag gcccgtaatc ccagcacttt gggtggccga ggagggcgga
tcacgaggtc aggagatcga
S
gccatcctgg ctaacacggt gaaaccccgt ctctactaaa aatacaaaaa attagccggg
cgtggtggcg ggcgcctgta gtcccagcta ctcgggaggc tgaggcagga gaagggcgtg
aacccgggag gcggagcttg cagtgaacgg agatcgcgcc actgcactcc agcctgggcg
acagagcgag actgcgtctc aaaaaataaa aaGACTAAAA CCGCTTGAAC AGGAACAGAA
ACTCTGAACA CATAAAATGC AACTAAATTC ACTGCAGTTT TATCCAGAAG TTATTTCATC
TTTTAATTTC TAC
There is no frequency submission for ss12923398.
No sufficient data to compute Hardy-weinberg probability for ss12923398.
There is no individual genotype data for ss12923398.
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