| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_008583.15_1000410 | | RefSNP(rs#) | rs3011765 | | Submitted Batch ID | CHR10_Overlap_SNPs | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to finished sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_008583
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR10_OVERLAP_SNPS | | Ascertainment Samplesize | 12 | | Population | N.D. |
| | Allele | | Observed Allele | G/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:10bA50E11-14b10.q1cposition:230quality:38sequence:10bA50E11-17g03.q1cposition:492quality:27sequence:10bA50E11-6d12.p1cposition:547quality:27sequence:10bA50E11-3c11.q1cposition:-454quality:33sequence:10bA50E11-29c12.q1cposition:180quality:35sequence:10bA50E11-31e09.q1cposition:-199quality:38sequence:10bA50E11-16c02.p1cposition:166quality:35sequence:10bA50E11-28h07.q1cposition:93quality:34sequence:10bA50E11-15a05.p1cposition:249quality:43sequence:10bA50E11-6d01.q1cposition:229quality:43sequence:10bA50E11-6d06.q1cposition:160quality:43 |
>gnl|dbSNP|ss12953968|allelePos=871|len=2673|taxid=9606|alleles='G/T'|mol=Genomic GAACATGCTG TGCTTTCTGA CAGCTATGAG GATGGACTTA ATACAGGTGG CTGCCCTTTT
GTAGCTCACT TTGATTCTAA CTTCAGCGTT GCATGATGCC Ctatgaatgg aatatacaat
gtgtgtcttt cacatctgtc ttctttcact tagaataata tttccaatgt catctacatt
tttagtatgt atcattacat caaacctttt tgttgctgaa taatattcca ttaatggata
tactaaaatt tatccattta tcagttaaga acgtttgggt ttttttcact ttttggctat
tgtgaataac acttctaaga acatttgtgt acaaggtttc ctggggatgt atgtttccat
ttctcatggc tacataccta agagtgaaat tgatgggcca tatggaaact ctatgtttaa
ccatttcaga aggtgccaga ctgtttccag tgtacacgaa ccattttata tacccactag
ctgtgtgagg gtcccagcgt ctctccatat tctagccaac atttattatc aactctcttt
ttgataaagt catcctagtg gttctgaagt tgcatctcat cgtagtttgc atttgtgttt
ccctgatgtt gaacctcttt catgtaccta ttcgccactt gtatatcttc tttggagcag
tgtgtactca acatttagta atttttaact ggtttgtgtt ttgtcattga gttataataa
ttctttatat gttccagata aaaatgcttt acaagatata atttgcagaa atattctccc
attctatggg ttgtccttta ctttcttgat ggtactcttt gaagcacaaa agtttttact
ttggatgaag tccaatttat ctattttctc
K
tttgttactt atggttttga tgtcatgttt aagaaaccat taactagtct taggtcatga
aatttattcc tatgcttttt ccttttttaa aaaccatctt aaacatttta aattgtgcaa
tttagtaatg ttatgtatat tcacatcatt gtgaaattta gatctttaga aattttttat
ctttcacaac tgaaattttg tacacattaa atactaattt cccccctact cccacccccg
gcccttggca atcactactt tatgtttctg tgatttcgac taccttaaat acttcatatg
aagaaaagta tttgtccttt tgtgattggc ttatttcact tagcataatg ttcttgagat
tgatccatgt tctagcatgt gacatgattt ccttctttcc gtaggctgct tagtcttcca
ttgtatgtat ataccatatt ttatcctttc atccaccaat ggatatttgg attggatctc
ttggctactg tgaataatgc tgtaataggg attgtatgga atttgtaaat tgttttaggt
aatatggaca ttttaacaat attaagtctt caaatccaca tgcatggaga tgtcttttca
tttatttata tactctttgg tttcttgtag cattgttgtt ttgtaatttt tagtgtccaa
gttgtttgcc tacttggtta agtttatttc taagtatttt gttctttttc atgctattat
aaataaaatt gtGGGTtttt tgtttttgtt tgtttgtttg tttatttgtt tgtttttgta
gtagagacag gatttcacta tgttggccag gctggtctca aactcctggc ctcaagtgat
ccgcctgcct cagcctccca acatgttggg attataagtg taagccgccg cacctggtct
gaaattttct tcttaatttc ctttccatat tggtcattgc taatgtatgg aactgcaatg
gatttttgtg tgttaatttt gcattttgta actttgcgga aatcatttat tagttcttac
aggtttttgg tggaattttt agggttttct acatataaaa ccatataatc tgtaaataga
aataatttta cttcttcctt tccaactgga atgcctttta tatatctttt ccttgtctaa
ttgctctggc ccagtactat gttgaataga agtggcaaga gtgggcatcc ttgactttct
cctgtacttt gaggaatagc tttgtcttcc actagtaaac ataatgttag ttgtgggcat
ttcatgtaag gcctttatta tgtggtagta ttttcctttt attcctagtt tgttgagtgt
ttttaatgat gaaatggtgt tgaattttgt tgaatgcttt gtctgaatca tgtggtttct
gtctttcatt atattaatgt agtgtatgac ttgattgatt tttgtatctt cactcatcct
tgcattccaa gtataaatcc aacttggtca tgatgtataa tctttttttt ctttgagata
gagtctcact ctgtcaccca cgctgcagtg cagtggtgca atcttggctc actgcaacct
ctgcctccca ggttcaagtg attctcctgc ctcagcctcc tgagtaactg ggattacagg
cacctgccac cacgcctggc taatttttgt atttttagta gagacggggt ttcaccatct
tggctaggct ggttttgaat tcctgacctc ttgGCTCTGA CATGGCAACT TTGCTGACCA
GTACAGGGTG TTCTTGTCCA GGAGTCCATG GACCCTCAGG CAATCTAGCA AAATTTGGAG
TC
There is no frequency submission for ss12953968.
No sufficient data to compute Hardy-weinberg probability for ss12953968.
There is no individual genotype data for ss12953968.
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