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Submitted SNP(ss) Details: ss12953971           
Submitter
HandleSC_SNP
Submitter SNP IDNT_008583.15_11049416
RefSNP(rs#)rs9414741
Submitted Batch IDCHR10_Overlap_SNPs
Submitted DateOct 22, 2003
Publication Cited[1] Overlap SNPs found by comparing shotgun reads to finished sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR10_OVERLAP_SNPS
Ascertainment Samplesize5
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:10bA338F14-15h06.q1cposition:364quality:24sequence:10bA338F14-22h07.q1cposition:377quality:42sequence:10bA338F14-8f02.q1cposition:-427quality:40sequence:10bA338F14-15a09.p1cposition:108quality:40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12953971|allelePos=151|len=390|taxid=9606|alleles='A/G'|mol=Genomic
 CCTCTGGTGT TTCAGTTAGA CTCCCCCCAA TTTGGACAAA TTTGGTCAAA CTCTAGTCGT
 GTTTCTTGTA GTGGATAAAT GATCAGAGCC TCCCCAACAG TCCCAGGCTG GCTGACCATG
 GACAACAGGA CTCTCACTTT ACTTGGTATc
 R
 taaggaatga catagtacct cacatttact agtttgttat aaaggatatt acaaagaata
 caaatgtaga gatgcatagg gcaaggtatg ggggaagggg tgtagagctt ccatgccttc
 cctgagggac cactctccag aaacctccgc gtgttccgct atctggaaac tctAAACACA
 TTTATCTTTA AAAGAAACTT TCTCTTAGTA CCTTAGGAAA AATCACTTCC ACTTACACT

  Submitted Frequency for ss12953971 back to top
There is no frequency submission for ss12953971.


  dbSNP summary of Genotypes for ss12953971 back to top
No sufficient data to compute Hardy-weinberg probability for ss12953971.


  Submitted individual genotype for ss12953971 back to top
There is no individual genotype data for ss12953971.