Submitter | Handle | SC_SNP | Submitter SNP ID | NT_008583.15_11050675 | RefSNP(rs#) | rs9414742 | Submitted Batch ID | CHR10_Overlap_SNPs | Submitted Date | Oct 22, 2003 | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to finished sequence [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_008583
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR10_OVERLAP_SNPS | Ascertainment Samplesize | 11 | Population | N.D. |
| Allele | Observed Allele | C/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:10bA338F14-27c09.p1cposition:471quality:23sequence:10bA338F14-12g01.p1cposition:-265quality:51sequence:10bA338F14-18h04.q1cposition:-185quality:43sequence:10bA338F14-16f11.q1cposition:-264quality:43sequence:10bA338F14-16a01.p1cposition:273quality:35sequence:10bA338F14-19h07.q1cposition:197quality:51sequence:10bA338F14-9h11.p1cposition:429quality:37sequence:10bA338F14-29g11.q1cposition:254quality:51sequence:10bA338F14-8c04.q1cposition:273quality:46sequence:10bA338F14-6g01.q1cposition:-215quality:43 |
>gnl|dbSNP|ss12953972|allelePos=151|len=301|taxid=9606|alleles='C/T'|mol=Genomic ATGTAGAATA TGGTTAAGTA ACTTATTTTA GTGTCTATTT CCATTTCTTA ATCCTTTAAG
TTTTTCTAAA ACATTTGAAA GGAAATAGAG ATTATCTGAT ATATGCTGTA AAATGACAAA
CATTGTCTGA CTCAACATAT TTGAGATAAC
Y
AATTGTTGAT TTTAAAAATC CAGTCCCAAA GTAGCTTATG AAATAGGATA AGAAACTTCA
TATTAGAGTT ACAGAAGACA AAATAATCAG TGTGATTCAT TCTACTTTAT CTCCACATTT
TGACTGGAAC TTTTCATCAC TTCTTTTTAT
There is no frequency submission for ss12953972.
No sufficient data to compute Hardy-weinberg probability for ss12953972.
There is no individual genotype data for ss12953972.
|