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Submitted SNP(ss) Details: ss12953973           
Submitter
HandleSC_SNP
Submitter SNP IDNT_008583.15_11051038
RefSNP(rs#)rs4948263
Submitted Batch IDCHR10_Overlap_SNPs
Submitted DateOct 22, 2003
Publication Cited[1] Overlap SNPs found by comparing shotgun reads to finished sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR10_OVERLAP_SNPS
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:10bA338F14-25a03.q1cposition:325quality:39sequence:10bA338F14-16h04.q1cposition:339quality:34sequence:10bA338F14-18h04.q1cposition:-548quality:29sequence:10bA338F14-30e08.q1cposition:-242quality:32sequence:10bA338F14-26d09.q1cposition:285quality:43sequence:10bA338F14-6g01.q1cposition:-578quality:25sequence:10bA338F14-22d11.p1cposition:-267quality:41sequence:10bA338F14-27c09.p1cposition:108quality:32sequence:10bA338F14-30b11.q1cposition:330quality:35

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12953973|allelePos=151|len=301|taxid=9606|alleles='G/A'|mol=Genomic
 AATCTTTAAA AATACACATA AAAAGTTAAC ATAAAGGAAA ACTAACTGAT TAGTGACAGA
 AAATAAACTG GTAACTTTTA GCCACTTATA AATAAGAAAA AGCAAACTTT GTTACCTTTG
 CCTGAATTCC CAGTGAATTG AACTGTGTTG
 R
 TTCTAGTTGC GCGTGTTTGG GAAAGAAAAG GAAAGAGAAA CTTTATTTTG TTCATTGGCA
 TGGCATCTAG GATGCAGGGG AAGAGGAATA AAAAAAGTGA CACCTTCAGA ACAGAATTTG
 GGGGAATAAA GAGGGCCAGA CTTTCAATTA

  Submitted Frequency for ss12953973 back to top
There is no frequency submission for ss12953973.


  dbSNP summary of Genotypes for ss12953973 back to top
No sufficient data to compute Hardy-weinberg probability for ss12953973.


  Submitted individual genotype for ss12953973 back to top
There is no individual genotype data for ss12953973.