| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_008583.15_11051390 | | RefSNP(rs#) | rs4948264 | | Submitted Batch ID | CHR10_Overlap_SNPs | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to finished sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_008583
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR10_OVERLAP_SNPS | | Ascertainment Samplesize | 6 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c/t_g |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:10bA338F14-28b10.p1cposition:417quality:31sequence:10bA338F14-22e05.p1cposition:-339quality:40sequence:10bA338F14-1f07.q1cposition:-328quality:32sequence:10bA338F14-6h08.q1cposition:303quality:51sequence:10bA338F14-28b10.q1cposition:-101quality:51 |
>gnl|dbSNP|ss12953974|allelePos=289|len=456|taxid=9606|alleles='C/T'|mol=Genomic CATCTAGGAT GCAGGGGAAG AGGAATAAAA AAAGTGACAC CTTCAGAACA GAATTTGGGG
GAATAAAGAG GGCCAGACTT TCAATTAAAA TATTTTCATC Tggccaggtg ctctatctca
cagctgtaat cccagcattt tgggaggctg aggcaggtgg atcatttgag cctaagagtt
tgagaccagc ctgggcaaaa caccatctct acaaagaaaa aaaaaaaaag aattaaaaat
tagtcgggca tgatggtgca tgcctgtggt cccagctatt tccaaggc
Y
gaggcaggag tatagcttga cccccggagg tggaggctgc agtgaactgt gattgtgcca
ctgcactcct gcctgggcga cagccagacc ctgtctcaaa aaataaaaTT TCATTTTTAT
TTCTTCCCAC ATAACTCCTG TTAGTCCTTT CTCGTTTCAC CCTTTAT
There is no frequency submission for ss12953974.
No sufficient data to compute Hardy-weinberg probability for ss12953974.
There is no individual genotype data for ss12953974.
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