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Submitted SNP(ss) Details: ss12953979           
Submitter
HandleSC_SNP
Submitter SNP IDNT_008583.15_11053035
RefSNP(rs#)rs2127352
Submitted Batch IDCHR10_Overlap_SNPs
Submitted DateOct 22, 2003
Publication Cited[1] Overlap SNPs found by comparing shotgun reads to finished sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR10_OVERLAP_SNPS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:10bA338F14-20e04.p1cposition:381quality:33sequence:10bA338F14-12b03.p1cposition:-506quality:40sequence:10bA338F14-30f01.p1cposition:-278quality:46

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12953979|allelePos=151|len=366|taxid=9606|alleles='C/A'|mol=Genomic
 TGCATGACAC ACCACTAATG TTTCTCTGAA TTATCTGCCT CCTTCTTGTA CAGATACATC
 TCATCTCTCT TACATTCCTT CTACCCTCTA CTGTTCATTA CAATCTAGAT cagggatcag
 taaacttttt attttgaggg ccagattgta
 M
 atattttagg ctttgcaggc cattagagtt tctgttgcaa ctattcaact ttgctattgt
 aatgtgaagg tggccataac taacaaacaa acatggctgt attccagtaa aattgaccca
 cacaaacagg tgaatggggc atagtttgct gactactgAT CCAGATTGCT AGCACACTAT
 CCTTTCATTT TCTAAAATAT CACCATGTAC TTAGT

  Submitted Frequency for ss12953979 back to top
There is no frequency submission for ss12953979.


  dbSNP summary of Genotypes for ss12953979 back to top
No sufficient data to compute Hardy-weinberg probability for ss12953979.


  Submitted individual genotype for ss12953979 back to top
There is no individual genotype data for ss12953979.