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Submitted SNP(ss) Details: ss12953986           
Submitter
HandleSC_SNP
Submitter SNP IDNT_008583.15_11076272
RefSNP(rs#)rs2448335
Submitted Batch IDCHR10_Overlap_SNPs
Submitted DateOct 22, 2003
Publication Cited[1] Overlap SNPs found by comparing shotgun reads to finished sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR10_OVERLAP_SNPS
Ascertainment Samplesize5
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:10bA338F14-12a09.p1cposition:98quality:45sequence:10bA338F14-15h09.q1cposition:497quality:27sequence:10bA338F14-24a04.p1cposition:-227quality:43sequence:10bA338F14-12g02.p1cposition:118quality:37

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12953986|allelePos=296|len=518|taxid=9606|alleles='G/A'|mol=Genomic
 TGGGAACCGT TTCAGAACAA CCAGCTTAAA TATATTCTCA CAAAACACAA ACAAAACAGA
 AGATGGAAGA CTATTAAAAT AGAGATATAA TAAACAGATT Ctaaaagaca tttttttgga
 aaagtatgga tatttgaatg tggataatat attagagtat tatggaatta gtgttacttt
 cctaggtttt gatagtggtg tttggttata taggaaaaca tcattctcaa gaaatgcaag
 tgaggcattt gaggaagcca tgatgtctgt aatttacttc aaaatggttc aggaa
 R
 TGGgaagaga gaaaagaaga agaagaagaa gagagcaaag aaagagaagg tgaagaagga
 ggagaaggaa gaggaaggaa gaagaatgac agaagagaag aaggaagaga gaagagagga
 ggagaggaga agagaagaGA AATCAAATTT GGTCAAACGA TAATTGGGGA ATTTAGGGTA
 AGGGTATAAG AGTTTTATTG CTACTACTCT CAACTATTTT GA

  Submitted Frequency for ss12953986 back to top
There is no frequency submission for ss12953986.


  dbSNP summary of Genotypes for ss12953986 back to top
No sufficient data to compute Hardy-weinberg probability for ss12953986.


  Submitted individual genotype for ss12953986 back to top
There is no individual genotype data for ss12953986.