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Submitted SNP(ss) Details: ss12953992           
Submitter
HandleSC_SNP
Submitter SNP IDNT_008583.15_11096290
RefSNP(rs#)rs2448347
Submitted Batch IDCHR10_Overlap_SNPs
Submitted DateOct 22, 2003
Publication Cited[1] Overlap SNPs found by comparing shotgun reads to finished sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR10_OVERLAP_SNPS
Ascertainment Samplesize5
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:10bA338F14-29g04.q1cposition:533quality:24sequence:10bA338F14-19d06.q1cposition:511quality:31sequence:10bA338F14-19e06.q1cposition:-155quality:43sequence:10bA338F14-3g03.q1cposition:427quality:35

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12953992|allelePos=151|len=301|taxid=9606|alleles='G/A'|mol=Genomic
 TTCCTTAAAG TATTTGCATT GGGTGTTTTT GGAGACCTGT CTTCCTAACA GTCCAAGTTA
 AAATCTAATT GTACTTGGCT GGGGCTAGAG ATTGGAAGTA GCTTTTAAGG TCAGATACCA
 CTTTAAAATT TATTTGTATA ATTCACTTCA
 R
 TGAAAAAATA AGCTCTCAGC AATTAGTAGC CAACCTAGAT ATGTTCTTTT GAATACAGGC
 TCCTTATAAA TAAGCACCTC CTGTACAAGG CTTAATTTTA AATAGTTGCC CTGAGATTCC
 TTTCTTAAAT TTGAGTTTTG AGTCTCTTCC

  Submitted Frequency for ss12953992 back to top
There is no frequency submission for ss12953992.


  dbSNP summary of Genotypes for ss12953992 back to top
No sufficient data to compute Hardy-weinberg probability for ss12953992.


  Submitted individual genotype for ss12953992 back to top
There is no individual genotype data for ss12953992.