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Submitted SNP(ss) Details: ss12992563           
Submitter
HandleSC_SNP
Submitter SNP IDNT_004321.15_1012000
RefSNP(rs#)rs9424283
Submitted Batch IDCHR1_Overlap_SNPs
Submitted DateOct 22, 2003
Publication Cited[1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_OVERLAP_SNPS
Ascertainment Samplesize12
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:1bB531C17-24h09.q1cposition:326quality:30sequence:1bB15E13-1b08.q1kposition:218quality:51sequence:1bB531C17-18g09.p1cposition:155quality:40sequence:1bB531C17-2h09.q1cposition:390quality:56sequence:1bB531C17-6e04.p1cposition:148quality:51sequence:1bB531C17-20a03.q1cposition:234quality:51sequence:1bB15E13-1k06.p1kposition:-472quality:45sequence:1bB15E13-1c12.q1kposition:-364quality:51sequence:1bB15E13-2h24.q1kposition:-224quality:42sequence:1bB531C17-11f09.q1cposition:-128quality:35sequence:1bB531C17-21g06.p1cposition:-483quality:27

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12992563|allelePos=201|len=401|taxid=9606|alleles='C/G'|mol=Genomic
 TGGGTGTGGA GGAGACAGGT AGGGCTGGAC TTGATAGACT CTGAACAGAG TTGGGGATGG
 GCTGATTACT CAGAGGACAC CTCCTGCTTC GCCTGGAATG GATGGCAGGG GTGATGGAAT
 TTCTCAAGCC CCAAGTTGTG AAGGAAATGA AAAAAGGAAC CTGCTGGAAT CCTCCGGCTC
 AAGCAATCAA GCTGCTCAGA
 S
 ACGGGTAAGG GCAGCATGGC TCAGAAATGG GATGGCGCTC AGAAGCGGGA AGGGTGGCAC
 GGCTCAGACA TGGGAGGGTG CACTGGATGA GTTCCCTCAG GGAGAACAGA GACCCAGGGA
 GGAAGCGACA ACTTAACAGT CAAGCAGGAA CAGCATGTGT AAAAGAAATA AAAGGGCTCG
 CGTGCCCTCT GGGAGAGAAT

  Submitted Frequency for ss12992563 back to top
There is no frequency submission for ss12992563.


  dbSNP summary of Genotypes for ss12992563 back to top
No sufficient data to compute Hardy-weinberg probability for ss12992563.


  Submitted individual genotype for ss12992563 back to top
There is no individual genotype data for ss12992563.