Submitter | Handle | SC_SNP | Submitter SNP ID | NT_004321.15_1039226 | RefSNP(rs#) | rs4648410 | Submitted Batch ID | CHR1_Overlap_SNPs | Submitted Date | Oct 22, 2003 | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004321
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR1_OVERLAP_SNPS | Ascertainment Samplesize | 9 | Population | N.D. |
| Allele | Observed Allele | C/G | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence:1bB531C17-4g12.q1cposition:358quality:35sequence:1bB15E13-2i07.q1kposition:252quality:56sequence:1bB15E13-2p04.p1kposition:398quality:45sequence:1bB531C17-2c11.q1cposition:-257quality:43sequence:1bB15E13-2o21.p1kposition:-564quality:42sequence:1bB531C17-15c12.p1cposition:-242quality:51sequence:1bB15E13-1o14.q1kposition:643quality:46sequence:1bB15E13-2e09.p1kposition:192quality:30 |
>gnl|dbSNP|ss12992570|allelePos=300|len=500|taxid=9606|alleles='C/G'|mol=Genomic CACAGACACC CAGCAACAAC GTCCCAGGCC CATGCTGATG GCCGTCACCC GACTACAGGA
GCCAGGGCTG AGCCTAGTAG GGTCTACTCT TCAGCTTCCT Attttttttt tttttgttga
gacagagtct cactctgtca cccaggctgg agggcagtgg cgcaatattg gctcaccaca
acctccacct cccgggttca agcaattctc ctgcttcagc ctcctgagta gctggactat
aggtgccggc cactgtgccc ggccaatttt ttatagggtt tcaccatgtt ggccaggct
S
atctcgaact cctgacctca agtgatctgc ctgccttagc ccccaaagtg ctgggattat
aggcgtgagc cactgtgcct ggccAGCTTC CTGATTCTAA ACACTTGAGT CAGTGATGTA
GAAAGAGCGG AGGACGGGAG TGTGAATCCT AGGCCACCCG TGGAGCCTTC GCACTGCACA
GCCAGTTTGC AGGTGGAGAA
There is no frequency submission for ss12992570.
No sufficient data to compute Hardy-weinberg probability for ss12992570.
There is no individual genotype data for ss12992570.
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