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Submitted SNP(ss) Details: ss12992576           
Submitter
HandleSC_SNP
Submitter SNP IDNT_004321.15_1041221
RefSNP(rs#)rs1104856
Submitted Batch IDCHR1_Overlap_SNPs
Submitted DateOct 22, 2003
Publication Cited[1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_OVERLAP_SNPS
Ascertainment Samplesize14
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:1bB15E13-3a22.q1kposition:546quality:51sequence:1bB531C17-24g07.q1cposition:-502quality:32sequence:1bB531C17-25e12.q1cposition:-112quality:56sequence:1bB15E13-1k07.q1kposition:-709quality:56sequence:1bB15E13-3n16.p1kposition:-218quality:51sequence:1bB531C17-10c07.p1cposition:105quality:39sequence:1bB15E13-2e17.q1kposition:-292quality:51sequence:1bB15E13-2h19.p1kposition:-339quality:56sequence:1bB531C17-24e01.p1cposition:-51quality:31sequence:1bB15E13-1k14.p1kposition:493quality:51sequence:1bB15E13-1h20.p1kposition:212quality:56sequence:1bB15E13-2i14.p1kposition:-538quality:40sequence:1bB531C17-23c10.q1cposition:-101quality:42

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12992576|allelePos=266|len=581|taxid=9606|alleles='G/A'|mol=Genomic
 GCCTTCTCAC CAGAATGTGG CCCACCGGCA CATGGGGTGC AGTTGCTTCC CCCTCCCCCG
 TGGAGGGACA TGACCTGCTC TAAGGCTCCA ATTCCTCCCT Ccccagcaca gaggtggcag
 gtccctctcc atcccttgaa tctgggtgac tgtggcttgc tttggccaat gggacagtgg
 cagacacgtg gcagggcagg ctgaaatgaa ctcatgcgcc tgggcttgtc ttgctgttgc
 cctctgctgc tgtcgcgaga acgcc
 R
 tgcccaggct ggcgtgctgg gctcagacac agaaagcaaa gctgaggtgc cgcagctgcc
 tccaagacca ttctcaatca gtctccggct gcggacccca ggcacacgcg tgtgtgagcc
 cagtcagggc cagcagagcc gcctggccgc cctatggcca agtgcagatg caagagccag
 gcggctgcga tcagctgaac ccagccaggc cagcAGGGCA TCCTCTCTGA TGGGCTGTGC
 TCTGGGGCCT CCAGGACGCC ACCCTCGTCA GGCTTCCTCC CCAGTGCATT TCTTCCCCAG
 CGCCTGGTTT GCCTT

  Submitted Frequency for ss12992576 back to top
There is no frequency submission for ss12992576.


  dbSNP summary of Genotypes for ss12992576 back to top
No sufficient data to compute Hardy-weinberg probability for ss12992576.


  Submitted individual genotype for ss12992576 back to top
There is no individual genotype data for ss12992576.