| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_004321.15_1043810 | | RefSNP(rs#) | rs9286792 | | Submitted Batch ID | CHR1_Overlap_SNPs | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004321
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D | | Submission report | view |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR1_OVERLAP_SNPS | | Ascertainment Samplesize | 13 | | Population | N.D. |
| | Allele | | Observed Allele | G/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c_g/a |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:1bB531C17-2b09.q1cposition:258quality:41sequence:1bB531C17-11f09.p1cposition:-439quality:28sequence:1bB531C17-1b03.q1cposition:-302quality:40sequence:1bB531C17-22c06.p1cposition:253quality:42sequence:1bB531C17-22g07.p1cposition:181quality:51sequence:1bB531C17-1e04.p1cposition:61quality:32sequence:1bB531C17-4h06.q1cposition:-246quality:38sequence:1bB15E13-1j20.q1kposition:599quality:56sequence:1bB15E13-1o03.p1kposition:349quality:56sequence:1bB15E13-2b19.q1kposition:472quality:47sequence:1bB15E13-2m06.q1kposition:240quality:51sequence:1bB531C17-16g12.q1cposition:272quality:45 |
>gnl|dbSNP|ss12992577|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic CAATGGCAAT AACTGAAATC AGAGGGGATG ATGGGCATTG CACGGGAGGA CAAGTAAAGG
TAACAACTCG AATGCAAACA CAAAGGCTCC CACATTCTGG AGATAACCAG GGGAAAAGAT
GTATGTGCAG TGAAAACTGC TTCTATTGGG TAGAAAAGGG GCAGGATGCC CTGTAGGAAA
AGCAGCCCCT GGAGGAAGGC
R
GATGGAAGCG GGGCAGGACG GCGCCTCTGT CTGGGGTGGA GGAAGGCAGA TGGAAGTGGG
GCAGGATGGC GGCCTCTGTC CAGGGTTCTT CCAAGATGCC TGATTCTATC GACCCGGAAA
CATGTCTTCT GTAATTACAG AACTTAATTC TTTAAAGTCC CCTAGAAATG TAATATAAAA
TGAATGTATT TACAGTTGGT
There is no frequency submission for ss12992577.
No sufficient data to compute Hardy-weinberg probability for ss12992577.
There is no individual genotype data for ss12992577.
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