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Submitted SNP(ss) Details: ss12992577           
Submitter
HandleSC_SNP
Submitter SNP IDNT_004321.15_1043810
RefSNP(rs#)rs9286792
Submitted Batch IDCHR1_Overlap_SNPs
Submitted DateOct 22, 2003
Publication Cited[1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_OVERLAP_SNPS
Ascertainment Samplesize13
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:1bB531C17-2b09.q1cposition:258quality:41sequence:1bB531C17-11f09.p1cposition:-439quality:28sequence:1bB531C17-1b03.q1cposition:-302quality:40sequence:1bB531C17-22c06.p1cposition:253quality:42sequence:1bB531C17-22g07.p1cposition:181quality:51sequence:1bB531C17-1e04.p1cposition:61quality:32sequence:1bB531C17-4h06.q1cposition:-246quality:38sequence:1bB15E13-1j20.q1kposition:599quality:56sequence:1bB15E13-1o03.p1kposition:349quality:56sequence:1bB15E13-2b19.q1kposition:472quality:47sequence:1bB15E13-2m06.q1kposition:240quality:51sequence:1bB531C17-16g12.q1cposition:272quality:45

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12992577|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 CAATGGCAAT AACTGAAATC AGAGGGGATG ATGGGCATTG CACGGGAGGA CAAGTAAAGG
 TAACAACTCG AATGCAAACA CAAAGGCTCC CACATTCTGG AGATAACCAG GGGAAAAGAT
 GTATGTGCAG TGAAAACTGC TTCTATTGGG TAGAAAAGGG GCAGGATGCC CTGTAGGAAA
 AGCAGCCCCT GGAGGAAGGC
 R
 GATGGAAGCG GGGCAGGACG GCGCCTCTGT CTGGGGTGGA GGAAGGCAGA TGGAAGTGGG
 GCAGGATGGC GGCCTCTGTC CAGGGTTCTT CCAAGATGCC TGATTCTATC GACCCGGAAA
 CATGTCTTCT GTAATTACAG AACTTAATTC TTTAAAGTCC CCTAGAAATG TAATATAAAA
 TGAATGTATT TACAGTTGGT

  Submitted Frequency for ss12992577 back to top
There is no frequency submission for ss12992577.


  dbSNP summary of Genotypes for ss12992577 back to top
No sufficient data to compute Hardy-weinberg probability for ss12992577.


  Submitted individual genotype for ss12992577 back to top
There is no individual genotype data for ss12992577.