| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_004321.15_1045414 | | RefSNP(rs#) | rs1936378 | | Submitted Batch ID | CHR1_Overlap_SNPs | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004321
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR1_OVERLAP_SNPS | | Ascertainment Samplesize | 14 | | Population | N.D. |
| | Allele | | Observed Allele | A/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:1bB531C17-12c03.q1cposition:383quality:40sequence:1bB531C17-22f05.p1cposition:429quality:56sequence:1bB15E13-1c21.p1kposition:-579quality:56sequence:1bB531C17-17b02.p1cposition:-306quality:45sequence:1bB531C17-19d11.q1cposition:351quality:56sequence:1bB531C17-21b02.p1cposition:-329quality:45sequence:1bB531C17-4b04.q1cposition:-422quality:46sequence:1bB531C17-7b10.p1cposition:298quality:56sequence:1bB531C17-8a03.p1cposition:152quality:45sequence:1bB531C17-8b11.p1cposition:-103quality:40sequence:1bB531C17-20e09.p1cposition:-133quality:39sequence:1bB531C17-12a11.q1cposition:181quality:50sequence:1bB531C17-19b04.q1cposition:279quality:51 |
>gnl|dbSNP|ss12992581|allelePos=201|len=401|taxid=9606|alleles='A/C'|mol=Genomic CAGACCAACC AGGCACCGGG GCCTTCTATG GATCCCGGTA ATCAGATGCT TCTGACCTGA
TGAGATGGCG GCAATGTGAC TGACGTCTGG AAGGCTGAGG CTGCTGCTGT GGCTGTGTAA
AGAAGTCCCG ATTCCGAAAG CTCCGACGGG AACATTTACA GATGCAACAA CGTGCTGTCT
GGGTTGGCTT CAACATTACA
M
GAGAGGGGAG CACGTGGGGG CACGGGAGAA ACAAGACGGG CTGAGTTGCT AGTTGCGCAA
GCTCAGTGAC CGTGACAAGG GAGAGTCCTG AGGGTTTCTG TCACTTTTCT GTGTACTCTG
TGATGCATTT CAAACTCTGA Gagagagaga gactgacaga cagacagagg gacagacaga
cagaGGGACA CAGAGAGCCA
There is no frequency submission for ss12992581.
No sufficient data to compute Hardy-weinberg probability for ss12992581.
There is no individual genotype data for ss12992581.
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