Submitter | Handle | SC_SNP | Submitter SNP ID | NT_004321.15_1046286 | RefSNP(rs#) | rs2027548 | Submitted Batch ID | CHR1_Overlap_SNPs | Submitted Date | Oct 22, 2003 | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004321
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR1_OVERLAP_SNPS | Ascertainment Samplesize | 14 | Population | N.D. |
| Allele | Observed Allele | G/A | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence:1bB531C17-21a08.p1cposition:416quality:40sequence:1bB531C17-23g05.q1cposition:-172quality:37sequence:1bB15E13-1e07.p1kposition:585quality:36sequence:1bB531C17-16a10.q1cposition:143quality:35sequence:1bB531C17-11c03.q1cposition:122quality:35sequence:1bB531C17-16f10.p1cposition:330quality:43sequence:1bB531C17-7a08.q1cposition:-155quality:26sequence:1bB15E13-3n15.q1kposition:563quality:56sequence:1bB531C17-4b04.p1cposition:164quality:29sequence:1bB531C17-15c05.q1cposition:-140quality:46sequence:1bB531C17-17b02.q1cposition:330quality:42sequence:1bB531C17-11h11.q1cposition:158quality:45sequence:1bB15E13-1k17.q1kposition:-289quality:56 |
>gnl|dbSNP|ss12992582|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic AGAGCTTGGA ATCAGGTAGG AAAGAGAATC GTTTAACCAA ATAGGGCTGG GTTTTATTAG
GCAAAAGGGA CCGCAGTGTT ACAGAATCTG GGCAAGATGT CACTGAGGGT CTCATTATCT
GGATAAAGGC AATGACCAGA ACAAAATAAA ACCATTTCAT GCTGTATCCC AGTGACACAG
GCTGGGCCTC AGTGAGTTGA
R
GCTCCTCGAT AAACCATTCA TAAATGTACG GAAGGAAATC ATGTGAACAC GTAGGTAAAC
GGAACGACTG CTCAGACAGG GCTCACTAGA CGCTGTCCCC TCCCTGAACA CTCATGTACT
GTACTCTGTG GCTATGGTCC CGCACTGACA CCACCACTGT CACCACCACT GCCATCCACA
GGTGTGTCAC CTACTTCACT
There is no frequency submission for ss12992582.
No sufficient data to compute Hardy-weinberg probability for ss12992582.
There is no individual genotype data for ss12992582.
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