| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_007299.12_1006123 | | RefSNP(rs#) | rs9442675 | | Submitted Batch ID | CHR6_NA17119 | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_007299
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR6_NA17119 | | Ascertainment Samplesize | 6 | | Population | N.D. |
| | Allele | | Observed Allele | G/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c_g/a |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 1 | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:6S17_2-197k12.p1kposition:123quality:39sequence:6S17_2-693a21.p1kposition:-171quality:35sequence:6S17_2-6f01.p1kposition:-481quality:45sequence:6S17_2-273l22.q1kposition:807quality:25sequence:6S17_2-257b19.q1kposition:-287quality:45 |
>gnl|dbSNP|ss13053135|allelePos=750|len=2750|taxid=9606|alleles='G/A'|mol=Genomic AGAGCTTAAG CACAACATTT AACAAATAAG TCTGCATCAT TCTGATGCAG AGAAGACCCC
AGTGTATCCA GGCTAACTGA TAGAAACAAT AACAAAAATG Ttctaagcag gaatatcaga
ggctgtacac aaaggaaatc agcctcacag ttagtttatt caaatcactt acgaaataaa
aacatgacca agcaaacaac aatattacct cagaggcttg ggcaaattaa tattcagagt
tgctatgctg tattatctaa aatgaccagt tttaaataat aagaattgta aggaaacagg
acagtatgac acatatgcag gggaaaaaag ttgataatag aaattttgtt tgatgtaacc
gaggtgtcaa atatagtagc taaagactta aaaacattgt ggctatattc aaggaactaa
ctaaacagaa gtaaataatt aaagtgaagt ttgaggatag tgtctcatca aatagaagaa
aaaaatcaaa taaagaaagt ataaaaacaa taaaatgaaa attatgggcc aggcacgggg
gctcatgcct ataatctcag caatttggga ggctaagcca ggcagatcac ctgaggtcag
gagttcaaga ccagcctggc caacatagtg aaaccctgtc tctacaaaaa tacaaaaatt
agccggactt tatggcgggt gcctgtaatc ccagccactg aggaggctaa ggtgggagaa
ttgcttgaac ttgggaggtg gaggttgcc
R
tgagccaaga tcacgccact gcatcccagc ctgggcgaca gaaaatgaga ctccatctca
aaaaattatg gagttgacaa ataaaaaaaa aaattaacta gattaactga aagtacaatt
gaactggcag aaggaagaat ctgtaaagta gaagatagtt caatagagat tatgcaatct
gtagaacaga gaaaaaggga aattaagtaa acagagactc atggaaatgc atgaaacatt
taagtgcacc aacatatgca aaatgggatt actagaaaaa aggagaaagg agccaaaaaa
attaaaaaat tagttcctga aatctccctc aatttgataa aaagcattaa tctacacata
taagaggctc aataaggtcc aagtaggata aacataaaag atccacaccc aggcacatta
aaatgaaaat gctgttagcc aaaaacaaaa aaattttgaa aacagcagga gaaaaaaatg
actcatcaca tacatgggta cttcaacaag attaatatct gactttatat tagaagcaat
ggagactaga atgcagtggg atgacttttt caaagtgtag gaagtaaaaa tgatccacaa
aaaaagtcat atatatagca aaactatctc ttaaaaataa aggaaaagga aagaatttcc
tagaaaagca aaatctgaat cagttgatac caaaatcaga aagatgtcac aagaaagaaa
aactataaac aaatacttct taggaattta gatgaaaaaa atcctcaacc aaatattaga
aaactaaatt taggaacatc ttaaaagatt aaatgccata accaagtggg atttgtccca
ggaatgcaga gttggttttg catctgaaac atcaattggt gtaatatgcc atattaaaga
ataaaggaaa aaattcacat gatcatctta atggatgcag aaaaacgatt tgccaaaatc
aattacccct ttcttgataa aaTCACACAC AATCTGACCA ACGACATTTA TGAAAAATCA
GTAGTTAACA TCATTCTTAA Tggcaaggtt gtctgctctc accataccac tcaacatttt
actggaggtt ctagccaggg ctatttggtc ttgttcccca ccccccaaaa aaattccaga
ttgtaaagaa agaactaaaa caatttgtat atgcaggtga tatgatcttg tatatagaaa
attctaaggt attcataaaa aaactgttag tcttgataaa tgagtcaagt caatttggca
ggataaaaga ccaatataca aaatcaattg tacttatatg catagaaatc aacattatga
aaataaattc taaaaatttc tgtaacaata ttatgaaaaa gaattactta tcaagaaatt
taacaaaata aatgtaaaat gttcacactg aaaattataa gcatcattgt tgaaataaag
aagatttaaa aacagaaaga tatttcaagc tcatggatca aaaaatcatg aagatggcaa
tattccccaa attaatttac aaatttacta taatttctat gaacatgtta gctccattat
ttcttcagaa attgacaagc agtttctaaa acatatgtgg aaattcaagg gctccagaat
atacaaaaca actttgatta cacaaagaca aacaacaaag ttggagtact aacacttcct
gactttaaaa tttaatacaa agctatagta atcaatagag tgtgggacta gcatacagat
agacctatag atcaatggaa ttaaattgag agcccagata tttgtggccc attgattttt
gaaaagggtg tcaagacaat ttaatggggt caggcaggga acaaagtaca aatggtactt
agaaactaga tatccactgg caataaatga agtggaatcc atacctcaca tcatacacaa
agtaactcaa aatgaatcat agacctaaat ataagtgcta gaaattttaa aagtcttaga
ataaaacctg agagtaaatA
There is no frequency submission for ss13053135.
No sufficient data to compute Hardy-weinberg probability for ss13053135.
There is no individual genotype data for ss13053135.
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