NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss13053154           
Submitter
HandleSC_SNP
Submitter SNP IDNT_007299.12_10139217
RefSNP(rs#)rs9293846
Submitted Batch IDCHR6_NA17119
Submitted DateOct 22, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR6_NA17119
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:6S17_2-246i14.p1kposition:275quality:43sequence:6S17_2-472o04.p1kposition:213quality:43

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13053154|allelePos=151|len=301|taxid=9606|alleles='G/T'|mol=Genomic
 ACAACTTTGC CCCTTTTTCT TTCTCTTACA TCACTTTACG TTTACTCCCA TTTAGGTGGA
 AGTGtttttt tttaatattc attaaattaa atGAGGTTAA TTTTGAGCAT AATAATAGAC
 TCTGCTTGAG CGGAAGGAAT AGGTGCTGTG
 K
 TTGTGGAAGA GGGAAGAAGA CATGTTCTCA CATAGGAATG TTGGTTAAAA AATATGTATT
 AGATTCAGGA TAATTGCTAG TAATTAATTC TAGAATGTAG ACAGCAGGGA ATGCAGGCTC
 ACTCACCCTC CTATTACCCA AACTGGGTAA

  Submitted Frequency for ss13053154 back to top
There is no frequency submission for ss13053154.


  dbSNP summary of Genotypes for ss13053154 back to top
No sufficient data to compute Hardy-weinberg probability for ss13053154.


  Submitted individual genotype for ss13053154 back to top
There is no individual genotype data for ss13053154.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement