| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_009799.12_10094305 | | RefSNP(rs#) | rs6490309 | | Submitted Batch ID | CHR13_NA07340 | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_009799
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR13_NA07340 | | Ascertainment Samplesize | 4 | | Population | N.D. |
| | Allele | | Observed Allele | T/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:13S07_2-369b23.p1kposition:448quality:51sequence:13S07_2-66d09.p1kposition:280quality:51sequence:13S07_2-349m09.p1kposition:-526quality:56 |
>gnl|dbSNP|ss13157397|allelePos=501|len=979|taxid=9606|alleles='T/A'|mol=Genomic AAAGGCACAA TTCTGGGTTT ACAGATTGGA AAGTTTCAAC ACATAACCAC TCATTGCTAA
TGATATAATG TTCATGAATA CTGTGGGTTT GAATAATTAA Gacactgctg gtaggaatgt
caaagggcac aaccatttga gaaaacaatt tgacagtttc ttgtaaattt aaatatgtgc
tttccaaatg actaagctac cccactccta ggtatttttc gacaagaaat ggaaacttat
gtccacacaa agacctatat gcaagtgttt gtagcagctt catttataat gctgaaaatc
ggaaagaatt tgaatgtttg tcagctagtg aatggataaa taaattgtag cacatccaca
caatggacta ctcctcagtg ctaaaaagga ggtgaactgg tgacacatgc aaagatatgg
gtgagtctca caagcattat gctaagtgaa agaagccaga cacaaaagct atgtacctct
catactttat gattttgttt
W
tgtgaaattt ggaaaacaca gaactacagg tacaaaaatc agattagtgg ttgccaggaa
ctggtggtat gagcagggct tgactgcaaa ggagcacaag agaactattt ggggtgatgg
aaatattcta tatcttgatc atggtgctgg ttatacaatg atatacatct gtcaaactca
tagaactgca cgctaagagg ggaaatttta ctctatgtgt tttattttat tttacatttt
tagaggtggg gatttcagta tattgcccaa gctggtctcg aaccgggctg aagccatcct
cttacctcag cctcccaagt agctgagatt acagttacca ccgtgcccgg ctgtatgtaa
attatacctc agtaaaaCTA CTTGAAAAAA GTTCTGTCCT CATTTTCAAT AGCTATCATC
TGGTGACTCA CATAACAGTT GATATCGAAT AAATGTTGAA TGAATCTGGG TGGAAGTT
There is no frequency submission for ss13157397.
No sufficient data to compute Hardy-weinberg probability for ss13157397.
There is no individual genotype data for ss13157397.
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