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Submitted SNP(ss) Details: ss13254260           
Submitter
HandleSC_SNP
Submitter SNP IDNT_009799.12_10000183
RefSNP(rs#)rs7330091
Submitted Batch IDCHR13_NA11321
Submitted DateOct 22, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR13_NA11321
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:13S212-302d02.p1kposition:615quality:29sequence:13S212-417n05.p1kposition:-125quality:56sequence:13S212-578l11.p1kposition:-217quality:43

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13254260|allelePos=2000|len=4000|taxid=9606|alleles='C/A'|mol=Genomic
 taacagagca ctaacacaca ggaagcaaaa cctgacagaa tcaaagggag aaatagacag
 ttcaacaata acaggtgaag atttcaatac cccactttca atagtagata gtgggctagg
 catagtggct catgtctgta atcccagcac tttgggaggc caaggcaggt ggatcacttg
 aggtcaggaa ttcaagacca gcctggtcaa catggcgaaa ccccatctcc actaaaaata
 cacaagttag ccagtgtggt gatgcacgcc tgaagtctca actactcggg aggctgaggc
 aggagactgg cttgaaccca ggaggcagat gttgcagtga gctgagatca caccactgca
 ctccagcctg ggcgacacag caagactcca cttaaaaaaa aaagtggata gaagaactgg
 acagaagatt ttaaaaagct agtagaacac cagaacaaca ctactaacca actataccca
 acgacatcta tagaacactt cacccatcac agcagggtat atattttcct caagtgcaca
 tgaaacattc tccaagatag accatatgct agaccataaa acaaacctca ataaatttaa
 aaggatagaa ataatacaaa gtatgttgtc tgaatacagt ggaatgcaat taaaaatcaa
 taacagaaat aaatttgaaa aattcacaaa tatgtggaaa ttgacacatc cctaaataat
 caatgggtca aagaagaaat ttaaaaagaa attagaaaat actttggtat gaatgtaaat
 gaagacacag catactaaaa tttaaaattt acgggatgaa gctaaaacag tgtttagagg
 ggaatttata gctataaatg cttatattga taaagaagaa acatctcaaa tcaataacct
 aaacttccac cttagaacat tgagtaaaga acagaaaact aaacctagag aaagcataag
 ggagaaaata ataaagatta tagtagaaat taaagagaat gcaaaacaac agaataaatt
 agtttcatta attttctaaa ccaaaagctg gttctttgaa aagacaaaca caactaataa
 accttaagcc agacaagcca agaaaaaaag agacaagact caaattacta gattcagaaa
 tgaaacaggg ccaggtgcag tggctcatgc ccgtaatccc agcactttgg gaggctgaga
 cgggtggatt atctgaggca agggttcaag accagcctgg ccaacatggt gaaaacccat
 ctctactaaa aatacaaaaa ttagccaggc atgatggtgg actcctgtaa tcccagctac
 tcaggaggct aaggcaggag aatcgcttga acccaggtgg cagaggttgc aggagccgag
 attgtgccac tgcactccag cctgggtgac agagctagac taaaaagaaa tgaaacagtg
 gacattacta ttaaaattat aaattaaaaa gcattatgaa ggaatattat aattatatgc
 cattacatta gatcacagat gaaatggata aatgccggga aagacacaaa ctactgaaac
 aagctcaaca agaattagac aacccaagca gacttttaac aagagattga attgtaacaa
 caacaacaac aacaacaaca agctgctcac gagggaaagt cagggcccag atggcaagtc
 aattctacca aacataaaga actaatacca atttttcaca aacttttcca aaaaatagaa
 gagaagagaa aactttccaa ctcattctag gaggctagtt ttactctgat atcaaaatca
 aagacatcac aagaaaatga caaaccaata tctattacga atatagctgc aaaaaactca
 ataaagtact agcaaactga attcagaaac atataaaaag aattatatac aatgcccaag
 tgggattttt ttcaggaatg caagattggt ttaacatcca aaaaccaatg taattactat
 atcatgtcaa tagaataaa
 M
 atcaaaaccc acatgactat cttaaaatgg cagaagaagg atttgacaaa aatccaagct
 cctttcgtga tgaaaacact caggaaaatg ggaattgcac tgaatttcct caacctaata
 aatggcatct agaaaaaacc ctacgtctaa catcatattt aatggtgaag cactggaagt
 ttccccctaa gatcaggaat aagacatcgt tgtccaccct caccgcttct attcaatagt
 gtactagagg ttccagacag agcaattggg caagaaaaat aaatccagat tgggaagatc
 aaaatggtac aggtattttg gaaaacagtc tctgttttca gatgacatga tcttacaaaa
 tgctaaggaa tccactaaaa aactactaga attaataaat gagttcagca agattgcagg
 atacaatgta caaaatgaat tatattccta tacatttgcg atgaacaatc tgaatgtgaa
 attaagaaaa caattccatt tataacagca tcaaaaagaa taatgtgttt aggaatatat
 ttaacaaaag aaatgtacaa cttatacttt gaaaactata agacattgtg gaaagaaatt
 aaagaagatc tactaagtgg gaaacatctc atgttcatgg attagaagac ttaatattgt
 taagatgtta atgtccccca aattgatcta cagattaaat gcaataactg taagaatccc
 agatgacttc acagaaattg acaaggtgat tctaaaattc atatgaaatt gcaagagacc
 cagaatagac aaaacaatct tgaaaagcaa aaacaatctt ggaagaccgc actccacatt
 tcttgatttc agatgaaaac tacaatgatc aagacagtgt ggtgctggca caatggatta
 gtggaataga attgagactc cagagatgaa cccatgtgtc tatggccact tgattttcaa
 ggagaccatt cagtggggaa agaataatct tttcaacaaa tggtgctgga acagctccac
 atgcaaaaga atggagttgt actcttatat cacaccatat acaaatatta accaaaaact
 gctaactata aaaaatatat attttatagt tatataatat aatatataat atattatata
 ttttatatat atttgcaaaa gggtctcact tttctaggct gaagtgcagt ggcaggacca
 tggctcactg cagcttcaac atcccaggcg caagtgatgc ccccacctca gcctcctgag
 tagctcagac tataggaatg tgccaccaca cccagctaat ttttttttaa aaattttttt
 gtagagataa gggtttcact atgttgccag ggctggtctc aaactcctgg gctcaagcag
 tcctcctgcc ccggtctccc aaagtgctgg gattgcaggc atgagccacc acacctggcc
 taatacaata ttctcagaag aaaccagagg taaatcttca tgatctcaaa tatggcattg
 gattcttata tatgatacca aaagcacaag caacacaaga aaaaataaac tgaactttat
 taaaatttga aacttgcatg cttcaaagaa cactgtgtag aaagtgaaaa ggtaacccaa
 agaatgggag aaaacatttg caaattatat atctcataag ggacttaaat ctggaatgta
 taaaATATAT TTTTATATGC CTCaaatata tttttaaaat ctacatatat aatatataaa
 catatgttta gaatacataa aaatctagat atattatgta tctatatatt atatctctag
 aacatataaa atatattata atatacaatt gtatgaaata ataaaaaGTt gaagaactct
 tacaactcag taataaagac aagctaatta aaaatgggaa aaggatctga actgacattt
 acccaaagaa gataaacaag cagggaataa acaaatgaaa agatacttaa catcataagc
 catcatggaa ataccaatca

  Submitted Frequency for ss13254260 back to top
There is no frequency submission for ss13254260.


  dbSNP summary of Genotypes for ss13254260 back to top
No sufficient data to compute Hardy-weinberg probability for ss13254260.


  Submitted individual genotype for ss13254260 back to top
There is no individual genotype data for ss13254260.

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