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Submitted SNP(ss) Details: ss13254261           
Submitter
HandleSC_SNP
Submitter SNP IDNT_009799.12_10020432
RefSNP(rs#)rs9550375
Submitted Batch IDCHR13_NA11321
Submitted DateOct 22, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR13_NA11321
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:13S212-367c19.p1kposition:229quality:51sequence:13S212-566p16.q1kposition:102quality:45

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13254261|allelePos=151|len=301|taxid=9606|alleles='T/C'|mol=Genomic
 TTTTATTATT CTTTCTCAGG GTTCCAATTT TACTGTGAGT TTCTACTTCT TAAAAGATTT
 TGCATTTCTC CCCTTTGAAT GTTACTTCAT TTGTTCATTC TCTAAGGAAG GAAGAACAGT
 ATCATAAAAA TTATGAATGA ATGAAAATGA
 Y
 TTTTTTACGA GTACCATAAA AAATGAATCA AACATGATTC ATTTTTGCCC TTTGCCCTTT
 GCACTGTATC TTGGTCAGTG CCAGTTCTCA TGTCATTATA GTAGTTCCTC AGTGAACATG
 AAATAATACA ACATTGTCCA TTGGAACCAG

  Submitted Frequency for ss13254261 back to top
There is no frequency submission for ss13254261.


  dbSNP summary of Genotypes for ss13254261 back to top
No sufficient data to compute Hardy-weinberg probability for ss13254261.


  Submitted individual genotype for ss13254261 back to top
There is no individual genotype data for ss13254261.