NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss13254268           
Submitter
HandleSC_SNP
Submitter SNP IDNT_009799.12_10120966
RefSNP(rs#)rs9550380
Submitted Batch IDCHR13_NA11321
Submitted DateOct 22, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR13_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:13S212-311p18.p1kposition:157quality:23

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13254268|allelePos=151|len=301|taxid=9606|alleles='C/G'|mol=Genomic
 CAGAGACCAG AAGAAATGCG GCCATCTCAG CCAATGCCCA GGTGGGGCAG AGACCCAGTG
 GAAGAGGGAG CATGTTGGCA GATGTCAGCC TGGATATATG AAGACAACCA GGGACCTGAT
 CCTTTGAACA GGTGGCACTA TGTTAGCACC
 S
 TAGAACTCAG ACGCAACTCC AGGGACATGA GTGGGGAGGG ACACGTCTGA ATCAACAGAT
 AAAATCCTGC CTGGATTTAC TCTGAAGTGA CTAAGCAACA GAATGGGGGC TCAAGAAACA
 AAATTAAATT CCGTACTTTT AAAAATGAAG

  Submitted Frequency for ss13254268 back to top
There is no frequency submission for ss13254268.


  dbSNP summary of Genotypes for ss13254268 back to top
No sufficient data to compute Hardy-weinberg probability for ss13254268.


  Submitted individual genotype for ss13254268 back to top
There is no individual genotype data for ss13254268.