NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss13254283           
Submitter
HandleSC_SNP
Submitter SNP IDNT_009799.12_10203953
RefSNP(rs#)rs6490319
Submitted Batch IDCHR13_NA11321
Submitted DateOct 22, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR13_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:13S212-122i09.p1kposition:485quality:51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13254283|allelePos=495|len=645|taxid=9606|alleles='A/G'|mol=Genomic
 ACTCTTTATC TGGATGACAT CCAGAGCCAC TGTCTTCTAT ATGATGACAT TCTAGCTACT
 TTACCCTTTC GGTACTTCTA CATCAGCATA TACTTCTATT Atcactatga cagggaagat
 atggagaatc atgcttcaac ttctcaatgc ttctgtgcag gaatgaaaca cacacatcac
 ttctactcac attttcattg gccaggatta gtcacatggc tatatctaat tttttttttt
 tttttttttt tttggagata gagtctcggt gtatcctcta ggctggagtg cagtggtgag
 atctcggttc aatgcaactt ccgcctcccg ggttcaagcg attctcatgc ctcaacctcc
 ctagtagctg ggattacagg catctgccac catgccaggc taattttgtt ttgtattttt
 tagtagagac agggttttgc catgttggcc aggctggtct caaactcctg acttcaggtg
 atccacctgc cttg
 R
 cctcccaaag tactgggatt acaggcatga cccactgcac ctggctGGCT ATATTTAAGA
 GACAAGAAAA AGCGTCACCT TCTTGCATAC TTGAAAGTAA GAGAAAAACC AATTATGGTT
 GAATGGAGAT AAACATCTAT TGCATAGGTG

  Submitted Frequency for ss13254283 back to top
There is no frequency submission for ss13254283.


  dbSNP summary of Genotypes for ss13254283 back to top
No sufficient data to compute Hardy-weinberg probability for ss13254283.


  Submitted individual genotype for ss13254283 back to top
There is no individual genotype data for ss13254283.