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Submitted SNP(ss) Details: ss13254288           
Submitter
HandleSC_SNP
Submitter SNP IDNT_009799.12_10205001
RefSNP(rs#)rs7335242
Submitted Batch IDCHR13_NA11321
Submitted DateOct 22, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR13_NA11321
Ascertainment Samplesize6
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:13S212-306b21.q1kposition:171quality:35sequence:13S212-627p20.p1kposition:-111quality:56sequence:13S212-299l23.q1kposition:216quality:51sequence:13S212-113k17.q1kposition:435quality:51sequence:13S212-215i05.q1kposition:129quality:40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13254288|allelePos=710|len=1119|taxid=9606|alleles='A/G'|mol=Genomic
 CCGGATGCTT CAATGTCGGA TATGGGCACT Tcttgctttg gcttataaag tgtgggggaa
 gtgatgtgtg acacttcctg gcaggagctt tcagaaccag tagatgctat actttgactc
 ctctctacta caagactgca atgtgcccga cagcaatggt ttcattagcc tgggccccag
 agtaagggtg atgtgaagca gagctgcagc cagcttggga tgggcatgca gtatgagcag
 gaaatttttt gttgttataa gccactgata ttttcaggtt gcttgttatt gcagtgtaat
 ttagacaaac ctgactaata caCATACCAT CCTTACTGCA TCTGTAGGAA TGGTTACAGC
 AGTAACCAAA AAGAAGTGAG AATGGAAAAA CAcagtcata tgccacatga tgatgtttca
 gtcaacaacg gactgcacat atgatggtgg tcccttaaga ttataatgaa acactttatt
 tttactgttc cttctccatg tttagatata tttaaataag caaacaccac tgtattacag
 tggcctacag gattccatac agtaacatac catgcaggtt tgtaacctag aagcaatagg
 ctagaccata cagcctaggt gttagtaggc tatcccacct aggtttgtgt aacgacacga
 tgacattttt cacaacgaca aaatcgccta atgctgcatt tctcggaac
 R
 tatccctatt gttaagagac gtatgactAT ATTCTTTCTG TAATAGTGAT aaaagtacag
 aatgcttaag gctaaatttg acaagacagg tttaagacat atgaagaaaa taaaatatta
 ttgaaagaca taaagcatgt caattctcca aaaaatccat atataaattt catgtaattc
 taatcataat tccaatggtt tctttttaat ttgataaagg cattttaaag ttcatgtgga
 aCagaattta cccacaatga tgctgccagg attaaatgaa gtaaagtatg taaagcaccc
 aggacaggat ttgacatcta tagtatatgc actgatatgt gttggctagt attACTCAGA
 AAAATAAATC TTTAAAATGG GGAGTGCCAA AATGTATCTT AGTATACAT

  Submitted Frequency for ss13254288 back to top
There is no frequency submission for ss13254288.


  dbSNP summary of Genotypes for ss13254288 back to top
No sufficient data to compute Hardy-weinberg probability for ss13254288.


  Submitted individual genotype for ss13254288 back to top
There is no individual genotype data for ss13254288.