| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_011516.5_47738 | | RefSNP(rs#) | rs9617519 | | Submitted Batch ID | CHR22_NA17119 | | Submitted Date | Oct 23, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 23 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_011516
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR22_NA17119 | | Ascertainment Samplesize | 4 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:22S17_2-59d07.q1kposition:324quality:42sequence:22Chr_22_17119_3-46e16.q1kposition:154quality:40sequence:22S17119-124m16.p1kposition:-219quality:43 |
>gnl|dbSNP|ss13378419|allelePos=1974|len=3302|taxid=9606|alleles='C/T'|mol=Genomic GGCTCCAGGC GAACATCTAG CCCCAGGGGG ACATCCAGCC CCTGGTGGAC ATCAGGGCTC
GCATGGATAA GCAGTTTACA GATGGACACc tgccacaggt gcctcacctc tactccctga
aacctcactt cccctcatgg gccttctgtc cgacttgggg tatccctagc caccctaggc
gcacactgga ctcgaaacag ggacgccagg gtccctgggg ctcaacgcaa gggttcatgg
gaatacactt tcgtccgtgg gagacccagT Ccccggttct cggcggtgca gttctttttt
ttttcctctg ccccaggtgc ctcaccttcc cctcatgggc cttctgtcca ccttggggta
cccctagcgg cccgaggcac accctgggct cgaaacaggg atgccagggt ccccggggca
cagcgcaagg gctgatgggg agacactttc ttccgtgggg gacccaggcc ccgcttctcc
gaggcgtgtt ttttttttcc tctgccccag gtgggtcacc ttcccctcat gggccttctg
cccgctttgg ggtaccccta gcggccccag gcaggtgttg ggctcgaata agggtcgccg
gggaccccgg ggcccagcgc aagggtcgat gggaagacac tttcactggt gggggaccaa
ggtcccgctt ctccgcagcg cggttttttt tttgtttttt tttttgtttg ttttttttct
gccccaggtg attcaccttt ccctcatggg ccttctgccc gctttgggta acccctagca
ggccagaggc gcaccctgga ttcgagccag ggatgacagg gtccccgggg cccagcgcag
gggctgatga gaaggcactt tcgtccgtgg gggaccctgg ccctgcttct ctgtggcgcg
gtttgttttt ttttttttct gccacaggtg ccttacctct cctccctcaa acctcacctt
cccctcatag gctttctgcc caccatgggg taccccaaga ggcctgaagt gcaccctggt
cttgaaccag ggatgccagg gtcccctggg cccagctcag gggctgatgg gaagacactt
ttgtccgtgg gggacacagg ccccgcttct ccgcggcagg gttttttttt tttttTTTTT
TCTCTGCcct ctccgcggcg tggtgttttt tatttttttc tgccacagtt gcttcacctc
tcctccctca aacctcacct tcccctcatg ggcgttctgt cagacttggg ttacccctag
tggccagacg cacaccctgg gttcgaaact gggacaccag gttccctggg gcccagcgca
agggctgatg ggaagacact ttcttccttg gggacccagg ctctgcttct ctgcggtgat
tttttgttgt tgttcttttg ttgttttttt ttttttttgc ttttccccag gtgcctcacc
tttccctcat gggctttctg cccgccttga gataccccta gcggtccaga ggcgcaccct
ggtttcgagc cagggacgct agggtctctg gggcccagtg tagggctgat gggtagggac
gttggtccgt gggggaccca ggcgccactt ctgggcgccg cagtttttta ttttttttct
ctgccccagg tgtctcacct ttccctcatg ggccttccgt ctgccttggg gtacccttag
caggccgagg cgcaccctgg gctcgagcca gggataccag ggtccccggg gtgcagcgca
agcgctgatg ggaagacagt ttcttctgta ggggacccag gccccgctta tctgcggcgc
ggttgttggt ttttttgtct gccccaggtg cgtcaccttc ccctcatggg ccttctgtcc
gcttttcggt acccctagcg gcctgaagcg caccctggtc tcgaaccagg aacgccaggg
tcccctgggc ccagcgcaag ggctaatggg aagacacttt cgtccgttgg gga
Y
ccaggctccg cttctccgtg gtgcggtttt tttttttttt ctgccccggg tgcctcacct
caccttcctc aaacctcaac tgcccctcat gggatttctg cccgtcttgg ggtaccccta
gcgggcccaa ggcgcacccg gggctcgaac caggCTccgc ttctccgtgg tgcggttttt
tttttttttc tgccccgggt gcctcacctc accttcctca aacctcaact gcccctcatg
ggatttctgc ccgtcttggg gtacccctag cgggcccaag gcgcacccgg ggctcgaacc
agggtccaca gggcccagcg caggggttga tgggaaggca ttttcctccg tgggggaccc
aggcccagct tctcctaggc gcggcttttt tttgttgttt tgttttgttt tgttttgttt
tgttttgttt tctgccacag atgcctcacc tctcctctct caaacgttaa cttcccatca
tgggctttct gtccgacttg gggtattcct agcggcccaa ggcgctccct tgactcgaac
catggacgcc agggtcgccg gggcccagcg caggggctga tgggaaggta ccttcgtccg
tgggtaccca ggccccgctt ctctaaggtg cgtttttttt ttttctctct gccccaggtc
cctcaccttc ccctcattgg ccttctgccc tccttggggt acccctatca ggcccgaggc
acacactgtg ctcgaaacag tgttgccagt gtccacgggg cccagcgcag gggctgatgg
gaaggcattt tcgtgcatgg gggacacagg cccccccttc tccgtggcgc tttttttttt
ttcctgccac aggtgcctca cctatcctcc ctcaaacctc accttcccct catgggcctt
ttgtccgcct tgaggtaccc ctagcggcct gaggcgcatc ctggggtgga accagggacg
ccagggtcca ctgggcccag cgaaggggct gatgggaagg cactttcgtc tgtgagggac
ccaggcccca ctcctctgca cccgaggttt ttgttttgtt tttttttttt ctctgcccca
ggtgcctcac cagctacttg ggaggctgag tcaggagaat tgcttgagtc tgggaaaccg
aggttgcagt gagtcaagag atcacagcac tgcactccag cctggacaaa agagtaagag
tccatcttaa ataaataaag aaagaaaCTA AAGACGTAAT AGGCATCACT GAAAAAGTTG
GAATTAGTTA ATACAGGGAA ACATTAGGAT GAATGATATA AAAGAACTAA AATCAAAATG
AAAATAAG
There is no frequency submission for ss13378419.
No sufficient data to compute Hardy-weinberg probability for ss13378419.
There is no individual genotype data for ss13378419.
| 
