NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss13395355           
Submitter
HandleSC_SNP
Submitter SNP IDNT_004321.15_805261
RefSNP(rs#)rs2821047
Submitted Batch IDCHR22_NA17119.2
Submitted DateOct 23, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 23 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA17119
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:22S17_2-11o23.q1kposition:501quality:56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13395355|allelePos=201|len=401|taxid=9606|alleles='A/C'|mol=Genomic
 GGATGCTGCC CTCCCCAGGC TCTGCTGAAG GACGGAAGGC AGGACCTGCC CAGATCTCGG
 AGCCTGGGGA AAAGCAGCCA CTCACTGCCT CCCTCCTCCC ACCCTGTTTC CCACGGGCTG
 GGCCCCACCC TCCTGTTCTC AGGGCCCCTC TCCTGGAGCC CGTGCACACC ACCCTGTGTC
 CCTCCCCTAA ACCCCATACC
 M
 TTCCCTCCCT CCCTGCCCTC CCAGGAAGCA TCTGCCTAAA TCTGAAACAA AGGGGAAAAG
 GGGCGTGCTT CTGAAAATCC CAGCCAGATC CAGCATCCCT GCTGTCCCGG CTGAGGACAC
 CATCTCTCAA GGCAGGCGGA GCTGACTCTG CCGGCGGAGA GGGGCACACG GACCCTACCA
 CAGATGCACC CAGCAGGACA

  Submitted Frequency for ss13395355 back to top
There is no frequency submission for ss13395355.


  dbSNP summary of Genotypes for ss13395355 back to top
No sufficient data to compute Hardy-weinberg probability for ss13395355.


  Submitted individual genotype for ss13395355 back to top
There is no individual genotype data for ss13395355.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement