NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss13405655           
Submitter
HandleSC_SNP
Submitter SNP IDNT_004434.15_205823
RefSNP(rs#)rs2762802
Submitted Batch IDCHRX_NA11321.2
Submitted DateOct 23, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 23 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:XChr_X_11321_2-603a11.p1kposition:181quality:56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13405655|allelePos=441|len=641|taxid=9606|alleles='T/C'|mol=Genomic
 AAAATACAAA CTCAATCTAG GCCACATAGA AACAGTTTAC TTAAAGTAGT CTGTGGTAGA
 TCATATTAAT AGCCATCCCC AGTGAATCAA ACTAGTTTGG Gtccataggc ctttgcaatg
 tgatactcct gccattaaga agtagagcct atttccccaa ctcttgaatc tgggttggca
 aagtggcttg ccttgactgg cagaatatga tataaatgct actgtatgag ttccagagac
 tagctttgag aggccttgca tttctgctct tgccttatta gcatcccaag acaaccatgc
 tgtgaagaag tcggtctacc ccactggaga aggaaaggct gttcagggaa gtgaagatgc
 cccagctgac agtcaccacc tgccagacat gtgagcaagg ctgtctgaga ccttcagtct
 cagtcaagcc atcagaaagt
 Y
 gcagccagtt gagtgatccc aagtgagacc agcagcgata atgcccagtt tgccaaaaca
 gaattgtgag aaataataaa tcattgttgt tttaagccaG GTGTGGGCAG ACATTTTCTT
 AAAGGACCAG ACAGTGTTTT AGGCTTGTGG GTCATATCAT CTCTGGCACA GGTACTCAAC
 TCTACCCTGT AACACAGAGC

  Submitted Frequency for ss13405655 back to top
There is no frequency submission for ss13405655.


  dbSNP summary of Genotypes for ss13405655 back to top
No sufficient data to compute Hardy-weinberg probability for ss13405655.


  Submitted individual genotype for ss13405655 back to top
There is no individual genotype data for ss13405655.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement