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Submitted SNP(ss) Details: ss13438483           
Submitter
HandleSC_SNP
Submitter SNP IDNT_004391.15_660343
RefSNP(rs#)rs9650970
Submitted Batch IDCHRX_NA17119.2
Submitted DateOct 23, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 23 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA17119
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:XSNP51152-99i18.q1kposition:390quality:35

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13438483|allelePos=2000|len=3470|taxid=9606|alleles='C/T'|mol=Genomic
 tggtctcgat ctcctgacct tgtgatccgc ccgcctcagc ctcccaaagt gctcagatta
 caggcgtgag ccaccgcgcc cggcCCgagt tgatttttgt ataaggtgag agatgaggat
 ccagtctcat tctcctacaa gtggacagcc aattacccca gcaccattgt tgaaaagggt
 gtcctttccc tactttatga ttttgtttgc tttgttgaag atcggttggc tgtaagtatt
 tgagtttatt tatgtgttct ctattctgtt ccattggtct atgtgcctat ttttatacca
 gtatcatgtg gttttggtga gtatggcctt gtagtatagt ttgaaatcag gtacagtgat
 gcctccagat tcgttcttgt tgcttagttc tgttttgcct atatggggtc tttttggttc
 cacacgaatt ttagaatttt ttttctagtt ctgtgaagaa tgAACCCTGA CCCTTTCTGA
 TTGTGGTTTC TTTCTTTCtt cttcttcttc tttttttttt tttttaatga gatggagttt
 cgctcttact gcccaagctg gagtgcaatg acgtgatctc agctcgctgt aacctccgcc
 tcccgggttc aagcgattct cctgcctcag cctcctgagt agctgggatt ataggtgccc
 gccaccaagc ccgactaatt ttgtattttt agttgagata ggattgctcc atgttcgtca
 ggctggtctc aaactcccaa cctcaggtga tctgcccgcc ttggcctccc aaaatgctgg
 gattatagac gcaagccacc gtgcctggcc Cttttttttt tttttttgaa actgagtctc
 actcttgtcg cccaggctgg agcgcaatgg cgtaatctca gctcactgca acctccacct
 cctgggttca agcaattctc ctgactcggc ctccccagta gctaggatta caggcgcctg
 ccaccatgcc tggctaattt ttgtatttat agtagagatg gggtttcgcc atgttggcca
 ggctggtctc gaactcctga cctcagatga cccacctgcc tcgccctccc aaagtgttag
 TGCCTGGCCC AACTGATTGT GGGTCTTTTt tttttttttt ttaatttatt tttttattga
 taattcttgg gtgtttctca cagaggggga tttggcaggg tcatgggaca atagtggagg
 gaaggtcagc agataaacaa gtgaacaaag gtctctggtt ttcctaggca gaggaccctg
 cggccttccg cagtgtttgt gtccctgatt acttgagatt agggattggt gatgactctt
 aacgagcatg ctgccttcaa gcatctgttt aacaaagcac atcttgcacc gcccttaatc
 catttaaccc tgagtggaca cagcacatgt ttcagagagc acagggttgg gggtaaggtc
 acagatcaac aggatcccaa ggcagaggaa tttttcttag tgcagaacaa aatgaaaagt
 ctcccatgtc tacttctttc tacacagaca gggcaaccat ccgatttctc agtcttttcc
 ccacctttcc cgcctttcta ttccacaaag ccgccattgt catcctggcc cgttctcaat
 gagctgttgg gcacacctcc cagacggggt ggtggccggg cagaggggct cctcacttcc
 cagtaggggc ggccgggcag aggcgcccct cacctcccgg acggggcggc tggcctggcg
 ggggggctga ccccccccca cctccctccc ggacggggtg gctgccgggc ggagacgctc
 ctcacttccc agatggggtg gctgccgggt ggagaggctc ctcacttctc agacggggca
 gctgccgggc ggaggggctc ctcacttctc agacggggtg gttgccaggc agagggtctc
 ctcacttctc agacggggcg gccgggcaga gacgctcctc acctcccaga cggggtctcg
 gccgggcaga ggcgctcct
 Y
 acatcccaga tggggcggcg gggcagaggc gctccccaca tctcagacga tgggcggccg
 ggcagagacg ctcctcactt cctagatggg atggcggctg ggaagaggcg ctcctcactt
 cctagatggg atggcggccg ggcggagacg ctcctcactt tccagactgg gcagccaggc
 agaggggctc ctcacatccc agacgatggg cggccaggca gaaacactcc tcacttccca
 gacggggtgg cagccaggca gaggctgcaa tctcggcact ttgggaggcc aaggccggcg
 gctgCTCCTT GCCCTCGGGC CCCGCGGGGC CCGTCCGCTC CTCCAGCCGC TGCCTcccgg
 gcggcgctcg ccggcgcggc ggcAAAGAct gattgtgggt cttaagaccc tcccataaga
 gggtcccatc ctataccctg aggtaaggaa tgctgATGTC atgaagcctc cgtgaaaatc
 cacgaggaca gggttcagga gcttctggat acttgaaaaa gtggagcctc ctgaagggtg
 gcacaaccag ggaggccatg gaagctctga gccccttccc ccataccttg ccttacatgt
 cccttcttct gtatccctgg caatatccta tataataaac cagtaaatgt aagtgtttct
 ctgaattctg tgagccgctc cagcaaatta attgaactca aagagggggt catgggaacc
 tcaacttgaa gctggttggt cagaagttct ggaggcctgg acttatgact gatgtttgta
 tgtattgttg ggggtagggg cagtcttggg gactgagccc tcaacctgtg ggatctggca
 ctgtcttagg gtacatagtg ttagagccga attggagaac acccagctgg tgtctgctgc
 ttggtgtgtg tgggaaaaaa ccgactcatt tggtcacaga aatcttttgt gttgacgtgg
 ttgttgtggt atgagagtag gggaaaaaca cagAGTTCTC GGGGCGCGGg ggcggggggg
 ctcacggctg taatcccacc actttgggag gccgagatgg gtggattacc tgagttcagg
 agttagtgac caccctggcc aacgtggtga aaccccatct ctactaaaaa tacaaacatt
 agccgggcgt ggtggcgggt gcctgtaatc ccagctactc aggaggctga ggcaggagaa
 tcgcttgaac ccaggaggca gaggttgcag taagctgaga ttgcaccacc gcactccagc
 ctgggcaaca aaagcgaaac tccatctcaa aaaacaaaaa acaaaaGCCA CAGAGTTTTT
 CCTACACAgg gtctttattt tcaaatgggg gctcctatgt agatgtaaac atctgtatgc
 tttcctcctg ttaatttgca ttatgtcaat ttaatttgca gacccagttg gagaccctaa
 gagggcagag aaaagtcgtg cccccctaTT

  Submitted Frequency for ss13438483 back to top
There is no frequency submission for ss13438483.


  dbSNP summary of Genotypes for ss13438483 back to top
No sufficient data to compute Hardy-weinberg probability for ss13438483.


  Submitted individual genotype for ss13438483 back to top
There is no individual genotype data for ss13438483.

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