Submitter | Handle | SC_SNP | Submitter SNP ID | NT_004391.15_660343 | RefSNP(rs#) | rs9650970 | Submitted Batch ID | CHRX_NA17119.2 | Submitted Date | Oct 23, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 23 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004391
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHRX_NA17119 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | C/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence:XSNP51152-99i18.q1kposition:390quality:35 |
>gnl|dbSNP|ss13438483|allelePos=2000|len=3470|taxid=9606|alleles='C/T'|mol=Genomic tggtctcgat ctcctgacct tgtgatccgc ccgcctcagc ctcccaaagt gctcagatta
caggcgtgag ccaccgcgcc cggcCCgagt tgatttttgt ataaggtgag agatgaggat
ccagtctcat tctcctacaa gtggacagcc aattacccca gcaccattgt tgaaaagggt
gtcctttccc tactttatga ttttgtttgc tttgttgaag atcggttggc tgtaagtatt
tgagtttatt tatgtgttct ctattctgtt ccattggtct atgtgcctat ttttatacca
gtatcatgtg gttttggtga gtatggcctt gtagtatagt ttgaaatcag gtacagtgat
gcctccagat tcgttcttgt tgcttagttc tgttttgcct atatggggtc tttttggttc
cacacgaatt ttagaatttt ttttctagtt ctgtgaagaa tgAACCCTGA CCCTTTCTGA
TTGTGGTTTC TTTCTTTCtt cttcttcttc tttttttttt tttttaatga gatggagttt
cgctcttact gcccaagctg gagtgcaatg acgtgatctc agctcgctgt aacctccgcc
tcccgggttc aagcgattct cctgcctcag cctcctgagt agctgggatt ataggtgccc
gccaccaagc ccgactaatt ttgtattttt agttgagata ggattgctcc atgttcgtca
ggctggtctc aaactcccaa cctcaggtga tctgcccgcc ttggcctccc aaaatgctgg
gattatagac gcaagccacc gtgcctggcc Cttttttttt tttttttgaa actgagtctc
actcttgtcg cccaggctgg agcgcaatgg cgtaatctca gctcactgca acctccacct
cctgggttca agcaattctc ctgactcggc ctccccagta gctaggatta caggcgcctg
ccaccatgcc tggctaattt ttgtatttat agtagagatg gggtttcgcc atgttggcca
ggctggtctc gaactcctga cctcagatga cccacctgcc tcgccctccc aaagtgttag
TGCCTGGCCC AACTGATTGT GGGTCTTTTt tttttttttt ttaatttatt tttttattga
taattcttgg gtgtttctca cagaggggga tttggcaggg tcatgggaca atagtggagg
gaaggtcagc agataaacaa gtgaacaaag gtctctggtt ttcctaggca gaggaccctg
cggccttccg cagtgtttgt gtccctgatt acttgagatt agggattggt gatgactctt
aacgagcatg ctgccttcaa gcatctgttt aacaaagcac atcttgcacc gcccttaatc
catttaaccc tgagtggaca cagcacatgt ttcagagagc acagggttgg gggtaaggtc
acagatcaac aggatcccaa ggcagaggaa tttttcttag tgcagaacaa aatgaaaagt
ctcccatgtc tacttctttc tacacagaca gggcaaccat ccgatttctc agtcttttcc
ccacctttcc cgcctttcta ttccacaaag ccgccattgt catcctggcc cgttctcaat
gagctgttgg gcacacctcc cagacggggt ggtggccggg cagaggggct cctcacttcc
cagtaggggc ggccgggcag aggcgcccct cacctcccgg acggggcggc tggcctggcg
ggggggctga ccccccccca cctccctccc ggacggggtg gctgccgggc ggagacgctc
ctcacttccc agatggggtg gctgccgggt ggagaggctc ctcacttctc agacggggca
gctgccgggc ggaggggctc ctcacttctc agacggggtg gttgccaggc agagggtctc
ctcacttctc agacggggcg gccgggcaga gacgctcctc acctcccaga cggggtctcg
gccgggcaga ggcgctcct
Y
acatcccaga tggggcggcg gggcagaggc gctccccaca tctcagacga tgggcggccg
ggcagagacg ctcctcactt cctagatggg atggcggctg ggaagaggcg ctcctcactt
cctagatggg atggcggccg ggcggagacg ctcctcactt tccagactgg gcagccaggc
agaggggctc ctcacatccc agacgatggg cggccaggca gaaacactcc tcacttccca
gacggggtgg cagccaggca gaggctgcaa tctcggcact ttgggaggcc aaggccggcg
gctgCTCCTT GCCCTCGGGC CCCGCGGGGC CCGTCCGCTC CTCCAGCCGC TGCCTcccgg
gcggcgctcg ccggcgcggc ggcAAAGAct gattgtgggt cttaagaccc tcccataaga
gggtcccatc ctataccctg aggtaaggaa tgctgATGTC atgaagcctc cgtgaaaatc
cacgaggaca gggttcagga gcttctggat acttgaaaaa gtggagcctc ctgaagggtg
gcacaaccag ggaggccatg gaagctctga gccccttccc ccataccttg ccttacatgt
cccttcttct gtatccctgg caatatccta tataataaac cagtaaatgt aagtgtttct
ctgaattctg tgagccgctc cagcaaatta attgaactca aagagggggt catgggaacc
tcaacttgaa gctggttggt cagaagttct ggaggcctgg acttatgact gatgtttgta
tgtattgttg ggggtagggg cagtcttggg gactgagccc tcaacctgtg ggatctggca
ctgtcttagg gtacatagtg ttagagccga attggagaac acccagctgg tgtctgctgc
ttggtgtgtg tgggaaaaaa ccgactcatt tggtcacaga aatcttttgt gttgacgtgg
ttgttgtggt atgagagtag gggaaaaaca cagAGTTCTC GGGGCGCGGg ggcggggggg
ctcacggctg taatcccacc actttgggag gccgagatgg gtggattacc tgagttcagg
agttagtgac caccctggcc aacgtggtga aaccccatct ctactaaaaa tacaaacatt
agccgggcgt ggtggcgggt gcctgtaatc ccagctactc aggaggctga ggcaggagaa
tcgcttgaac ccaggaggca gaggttgcag taagctgaga ttgcaccacc gcactccagc
ctgggcaaca aaagcgaaac tccatctcaa aaaacaaaaa acaaaaGCCA CAGAGTTTTT
CCTACACAgg gtctttattt tcaaatgggg gctcctatgt agatgtaaac atctgtatgc
tttcctcctg ttaatttgca ttatgtcaat ttaatttgca gacccagttg gagaccctaa
gagggcagag aaaagtcgtg cccccctaTT
There is no frequency submission for ss13438483.
No sufficient data to compute Hardy-weinberg probability for ss13438483.
There is no individual genotype data for ss13438483.
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